External Links
- Aracyc
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- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
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- pep2pro
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- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G52330:CDS:10 | 130 | Chr5: 21247596-21247725 | Arabidopsis thaliana |
AT5G52330:CDS:9 | 104 | Chr5: 21247814-21247917 | Arabidopsis thaliana |
AT5G52330:CDS:8 | 370 | Chr5: 21248025-21248394 | Arabidopsis thaliana |
AT5G52330:CDS:7 | 156 | Chr5: 21248547-21248702 | Arabidopsis thaliana |
AT5G52330:CDS:6 | 133 | Chr5: 21248847-21248979 | Arabidopsis thaliana |
AT5G52330:CDS:5 | 69 | Chr5: 21249050-21249118 | Arabidopsis thaliana |
AT5G52330:CDS:3 | 89 | Chr5: 21249210-21249298 | Arabidopsis thaliana |
AT5G52330:CDS:2 | 112 | Chr5: 21249403-21249514 | Arabidopsis thaliana |
AT5G52330:CDS:1 | 31 | Chr5: 21249702-21249732 | Arabidopsis thaliana |
AT5G52330:CDS:10.1 | 130 | Chr5: 21247596-21247725 | Arabidopsis thaliana |
AT5G52330:CDS:9.1 | 104 | Chr5: 21247814-21247917 | Arabidopsis thaliana |
AT5G52330:CDS:8.1 | 370 | Chr5: 21248025-21248394 | Arabidopsis thaliana |
AT5G52330:CDS:7.1 | 156 | Chr5: 21248547-21248702 | Arabidopsis thaliana |
AT5G52330:CDS:6.1 | 133 | Chr5: 21248847-21248979 | Arabidopsis thaliana |
AT5G52330:CDS:5.1 | 69 | Chr5: 21249050-21249118 | Arabidopsis thaliana |
AT5G52330:CDS:3.1 | 89 | Chr5: 21249210-21249298 | Arabidopsis thaliana |
AT5G52330:CDS:2.1 | 112 | Chr5: 21249403-21249514 | Arabidopsis thaliana |
AT5G52330:CDS:1.1 | 31 | Chr5: 21249702-21249732 | Arabidopsis thaliana |
AT5G52330:CDS:10.2 | 130 | Chr5: 21247596-21247725 | Arabidopsis thaliana |
AT5G52330:CDS:9.2 | 104 | Chr5: 21247814-21247917 | Arabidopsis thaliana |
AT5G52330:CDS:8.2 | 370 | Chr5: 21248025-21248394 | Arabidopsis thaliana |
AT5G52330:CDS:7.2 | 156 | Chr5: 21248547-21248702 | Arabidopsis thaliana |
AT5G52330:CDS:6.2 | 133 | Chr5: 21248847-21248979 | Arabidopsis thaliana |
AT5G52330:CDS:5.2 | 69 | Chr5: 21249050-21249118 | Arabidopsis thaliana |
AT5G52330:CDS:3.2 | 89 | Chr5: 21249210-21249298 | Arabidopsis thaliana |
AT5G52330:CDS:2.2 | 112 | Chr5: 21249403-21249514 | Arabidopsis thaliana |
AT5G52330:CDS:1.2 | 31 | Chr5: 21249702-21249732 | Arabidopsis thaliana |
AT5G52330:CDS:10.3 | 130 | Chr5: 21247596-21247725 | Arabidopsis thaliana |
AT5G52330:CDS:9.3 | 104 | Chr5: 21247814-21247917 | Arabidopsis thaliana |
AT5G52330:CDS:8.3 | 370 | Chr5: 21248025-21248394 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G52330:exon:3 | 175 | Chr5: 21249702-21249876 | Arabidopsis thaliana |
AT5G52330:exon:15 | 371 | Chr5: 21247355-21247725 | Arabidopsis thaliana |
AT5G52330:exon:2 | 85 | Chr5: 21250237-21250321 | Arabidopsis thaliana |
AT5G52330:exon:14 | 310 | Chr5: 21247416-21247725 | Arabidopsis thaliana |
AT5G52330:exon:6 | 112 | Chr5: 21249403-21249514 | Arabidopsis thaliana |
AT5G52330:exon:4 | 72 | Chr5: 21249702-21249773 | Arabidopsis thaliana |
AT5G52330:exon:1 | 48 | Chr5: 21250379-21250426 | Arabidopsis thaliana |
AT5G52330:exon:13 | 130 | Chr5: 21247596-21247725 | Arabidopsis thaliana |
AT5G52330:exon:12 | 104 | Chr5: 21247814-21247917 | Arabidopsis thaliana |
AT5G52330:exon:11 | 370 | Chr5: 21248025-21248394 | Arabidopsis thaliana |
AT5G52330:exon:10 | 156 | Chr5: 21248547-21248702 | Arabidopsis thaliana |
AT5G52330:exon:9 | 133 | Chr5: 21248847-21248979 | Arabidopsis thaliana |
AT5G52330:exon:8 | 69 | Chr5: 21249050-21249118 | Arabidopsis thaliana |
AT5G52330:exon:7 | 89 | Chr5: 21249210-21249298 | Arabidopsis thaliana |
AT5G52330:exon:5 | 511 | Chr5: 21249403-21249913 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G52330:five_prime_UTR:3 | 144 | Chr5: 21249733-21249876 | Arabidopsis thaliana |
AT5G52330:five_prime_UTR:2 | 85 | Chr5: 21250237-21250321 | Arabidopsis thaliana |
AT5G52330:five_prime_UTR:4 | 41 | Chr5: 21249733-21249773 | Arabidopsis thaliana |
AT5G52330:five_prime_UTR:1 | 48 | Chr5: 21250379-21250426 | Arabidopsis thaliana |
AT5G52330:five_prime_UTR:6 | 10 | Chr5: 21249289-21249298 | Arabidopsis thaliana |
AT5G52330:five_prime_UTR:5 | 511 | Chr5: 21249403-21249913 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G52330.3 | 1579 | Chr5: 21247355-21249876 |
AT5G52330.4 | 1561 | Chr5: 21247355-21250321 |
AT5G52330.1 | 1463 | Chr5: 21247416-21250426 |
AT5G52330.2 | 1562 | Chr5: 21247596-21249913 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G52330:three_prime_UTR:2 | 241 | Chr5: 21247355-21247595 | Arabidopsis thaliana |
AT5G52330:three_prime_UTR:1 | 180 | Chr5: 21247416-21247595 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...