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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G51980:CDS:8 | 145 | Chr5: 21113650-21113794 | Arabidopsis thaliana |
AT5G51980:CDS:7 | 98 | Chr5: 21113875-21113972 | Arabidopsis thaliana |
AT5G51980:CDS:6 | 60 | Chr5: 21114069-21114128 | Arabidopsis thaliana |
AT5G51980:CDS:5 | 120 | Chr5: 21114207-21114326 | Arabidopsis thaliana |
AT5G51980:CDS:4 | 147 | Chr5: 21114428-21114574 | Arabidopsis thaliana |
AT5G51980:CDS:3 | 102 | Chr5: 21114667-21114768 | Arabidopsis thaliana |
AT5G51980:CDS:2 | 90 | Chr5: 21114888-21114977 | Arabidopsis thaliana |
AT5G51980:CDS:1 | 552 | Chr5: 21115351-21115902 | Arabidopsis thaliana |
AT5G51980:CDS:8.1 | 145 | Chr5: 21113650-21113794 | Arabidopsis thaliana |
AT5G51980:CDS:7.1 | 98 | Chr5: 21113875-21113972 | Arabidopsis thaliana |
AT5G51980:CDS:6.1 | 60 | Chr5: 21114069-21114128 | Arabidopsis thaliana |
AT5G51980:CDS:5.1 | 120 | Chr5: 21114207-21114326 | Arabidopsis thaliana |
AT5G51980:CDS:4.1 | 147 | Chr5: 21114428-21114574 | Arabidopsis thaliana |
AT5G51980:CDS:3.1 | 102 | Chr5: 21114667-21114768 | Arabidopsis thaliana |
AT5G51980:CDS:2.1 | 90 | Chr5: 21114888-21114977 | Arabidopsis thaliana |
AT5G51980:CDS:1.1 | 552 | Chr5: 21115351-21115902 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G51970:exon:7 | 312 | Chr5: 21113092-21113403 | Arabidopsis thaliana |
AT5G51980:exon:11 | 434 | Chr5: 21113361-21113794 | Arabidopsis thaliana |
AT5G51980:exon:3 | 583 | Chr5: 21115351-21115933 | Arabidopsis thaliana |
AT5G51980:exon:1 | 149 | Chr5: 21116049-21116197 | Arabidopsis thaliana |
AT5G51980:exon:10 | 145 | Chr5: 21113650-21113794 | Arabidopsis thaliana |
AT5G51980:exon:9 | 98 | Chr5: 21113875-21113972 | Arabidopsis thaliana |
AT5G51980:exon:8 | 60 | Chr5: 21114069-21114128 | Arabidopsis thaliana |
AT5G51980:exon:7 | 120 | Chr5: 21114207-21114326 | Arabidopsis thaliana |
AT5G51980:exon:6 | 147 | Chr5: 21114428-21114574 | Arabidopsis thaliana |
AT5G51980:exon:5 | 102 | Chr5: 21114667-21114768 | Arabidopsis thaliana |
AT5G51980:exon:4 | 90 | Chr5: 21114888-21114977 | Arabidopsis thaliana |
AT5G51980:exon:2 | 964 | Chr5: 21115351-21116314 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G51980:five_prime_UTR:3 | 31 | Chr5: 21115903-21115933 | Arabidopsis thaliana |
AT5G51980:five_prime_UTR:1 | 149 | Chr5: 21116049-21116197 | Arabidopsis thaliana |
AT5G51980:five_prime_UTR:2 | 412 | Chr5: 21115903-21116314 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G51970 | locus:2173093 | AT5G51970 | 1959 | Chr5: 21111445-21113403 | A. thaliana | GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11) | Encodes a sorbitol dehydrogenase that exhibits greatest oxidative activity with sorbitol, ribitol and xylitol as substrates. SDH can be thiolated in vitro. | GroES-like zinc-binding alcohol dehydrogenase family protein | ATSDH |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G51970.1 | 1589 | Chr5: 21111445-21113403 |
AT5G51970.2 | 1357 | Chr5: 21111594-21113403 |
AT5G51980.1 | 1783 | Chr5: 21113361-21116197 |
AT5G51980.2 | 1726 | Chr5: 21113650-21116314 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G51970:three_prime_UTR:1 | 119 | Chr5: 21113285-21113403 | Arabidopsis thaliana |
AT5G51980:three_prime_UTR:1 | 289 | Chr5: 21113361-21113649 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
mRNA binding | ECO |
DNA binding | ECO |
metal ion binding | ECO |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...