Lists
This Gene is in one list:
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G51200:CDS:1 | 141 | Chr5: 20804926-20805066 | Arabidopsis thaliana |
AT5G51200:CDS:2 | 96 | Chr5: 20805151-20805246 | Arabidopsis thaliana |
AT5G51200:CDS:3 | 75 | Chr5: 20805480-20805554 | Arabidopsis thaliana |
AT5G51200:CDS:4 | 105 | Chr5: 20805656-20805760 | Arabidopsis thaliana |
AT5G51200:CDS:5 | 111 | Chr5: 20805851-20805961 | Arabidopsis thaliana |
AT5G51200:CDS:6 | 160 | Chr5: 20806137-20806296 | Arabidopsis thaliana |
AT5G51200:CDS:7 | 86 | Chr5: 20806812-20806897 | Arabidopsis thaliana |
AT5G51200:CDS:8 | 123 | Chr5: 20807010-20807132 | Arabidopsis thaliana |
AT5G51200:CDS:9 | 228 | Chr5: 20807246-20807473 | Arabidopsis thaliana |
AT5G51200:CDS:10 | 90 | Chr5: 20808155-20808244 | Arabidopsis thaliana |
AT5G51200:CDS:12 | 144 | Chr5: 20808647-20808790 | Arabidopsis thaliana |
AT5G51200:CDS:13 | 117 | Chr5: 20809044-20809160 | Arabidopsis thaliana |
AT5G51200:CDS:14 | 207 | Chr5: 20809253-20809459 | Arabidopsis thaliana |
AT5G51200:CDS:15 | 102 | Chr5: 20809650-20809751 | Arabidopsis thaliana |
AT5G51200:CDS:16 | 138 | Chr5: 20809870-20810007 | Arabidopsis thaliana |
AT5G51200:CDS:17 | 131 | Chr5: 20810389-20810519 | Arabidopsis thaliana |
AT5G51200:CDS:18 | 120 | Chr5: 20810607-20810726 | Arabidopsis thaliana |
AT5G51200:CDS:20 | 124 | Chr5: 20810929-20811052 | Arabidopsis thaliana |
AT5G51200:CDS:21 | 198 | Chr5: 20811159-20811356 | Arabidopsis thaliana |
AT5G51200:CDS:22 | 119 | Chr5: 20811922-20812040 | Arabidopsis thaliana |
AT5G51200:CDS:24 | 151 | Chr5: 20812249-20812399 | Arabidopsis thaliana |
AT5G51200:CDS:25 | 113 | Chr5: 20812544-20812656 | Arabidopsis thaliana |
AT5G51200:CDS:26 | 82 | Chr5: 20812728-20812809 | Arabidopsis thaliana |
AT5G51200:CDS:27 | 87 | Chr5: 20812914-20813000 | Arabidopsis thaliana |
AT5G51200:CDS:28 | 78 | Chr5: 20813129-20813206 | Arabidopsis thaliana |
AT5G51200:CDS:29 | 204 | Chr5: 20813898-20814101 | Arabidopsis thaliana |
AT5G51200:CDS:30 | 93 | Chr5: 20814502-20814594 | Arabidopsis thaliana |
AT5G51200:CDS:31 | 114 | Chr5: 20814668-20814781 | Arabidopsis thaliana |
AT5G51200:CDS:32 | 171 | Chr5: 20814879-20815049 | Arabidopsis thaliana |
AT5G51200:CDS:33 | 56 | Chr5: 20815162-20815217 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G51200:exon:1 | 352 | Chr5: 20804715-20805066 | Arabidopsis thaliana |
AT5G51200:exon:13 | 144 | Chr5: 20808647-20808790 | Arabidopsis thaliana |
AT5G51200:exon:23 | 119 | Chr5: 20811922-20812040 | Arabidopsis thaliana |
AT5G51200:exon:51 | 302 | Chr5: 20819328-20819629 | Arabidopsis thaliana |
AT5G51200:exon:19 | 120 | Chr5: 20810607-20810726 | Arabidopsis thaliana |
AT5G51200:exon:45 | 87 | Chr5: 20818248-20818334 | Arabidopsis thaliana |
AT5G51200:exon:2 | 141 | Chr5: 20804926-20805066 | Arabidopsis thaliana |
AT5G51200:exon:3 | 96 | Chr5: 20805151-20805246 | Arabidopsis thaliana |
AT5G51200:exon:4 | 75 | Chr5: 20805480-20805554 | Arabidopsis thaliana |
AT5G51200:exon:5 | 105 | Chr5: 20805656-20805760 | Arabidopsis thaliana |
AT5G51200:exon:6 | 111 | Chr5: 20805851-20805961 | Arabidopsis thaliana |
AT5G51200:exon:7 | 160 | Chr5: 20806137-20806296 | Arabidopsis thaliana |
AT5G51200:exon:8 | 86 | Chr5: 20806812-20806897 | Arabidopsis thaliana |
AT5G51200:exon:9 | 123 | Chr5: 20807010-20807132 | Arabidopsis thaliana |
AT5G51200:exon:10 | 228 | Chr5: 20807246-20807473 | Arabidopsis thaliana |
AT5G51200:exon:11 | 90 | Chr5: 20808155-20808244 | Arabidopsis thaliana |
AT5G51200:exon:12 | 126 | Chr5: 20808647-20808772 | Arabidopsis thaliana |
AT5G51200:exon:14 | 117 | Chr5: 20809044-20809160 | Arabidopsis thaliana |
AT5G51200:exon:15 | 207 | Chr5: 20809253-20809459 | Arabidopsis thaliana |
AT5G51200:exon:16 | 102 | Chr5: 20809650-20809751 | Arabidopsis thaliana |
AT5G51200:exon:17 | 138 | Chr5: 20809870-20810007 | Arabidopsis thaliana |
AT5G51200:exon:18 | 131 | Chr5: 20810389-20810519 | Arabidopsis thaliana |
AT5G51200:exon:20 | 63 | Chr5: 20810664-20810726 | Arabidopsis thaliana |
AT5G51200:exon:21 | 124 | Chr5: 20810929-20811052 | Arabidopsis thaliana |
AT5G51200:exon:22 | 198 | Chr5: 20811159-20811356 | Arabidopsis thaliana |
AT5G51200:exon:24 | 122 | Chr5: 20811922-20812043 | Arabidopsis thaliana |
AT5G51200:exon:25 | 151 | Chr5: 20812249-20812399 | Arabidopsis thaliana |
AT5G51200:exon:26 | 113 | Chr5: 20812544-20812656 | Arabidopsis thaliana |
AT5G51200:exon:27 | 82 | Chr5: 20812728-20812809 | Arabidopsis thaliana |
AT5G51200:exon:28 | 87 | Chr5: 20812914-20813000 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G51200:five_prime_UTR:1 | 211 | Chr5: 20804715-20804925 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G51200.2 | 6024 | Chr5: 20804715-20819629 |
AT5G51200.3 | 5758 | Chr5: 20804926-20819592 |
AT5G51200.1 | 5704 | Chr5: 20804926-20819592 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G51200:three_prime_UTR:2 | 221 | Chr5: 20819409-20819629 | Arabidopsis thaliana |
AT5G51200:three_prime_UTR:1 | 184 | Chr5: 20819409-20819592 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A2H1ZE90_ARATH A0A1P8BGZ1_ARATH A0A1P8BGY9_ARATH | similarity | Belongs to the NUP186/NUP192/NUP205 family. |
Function
Gene Ontology
cellular component | |
---|---|
nuclear pore | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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