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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49780:CDS:1 | 88 | Chr5: 20228815-20228902 | Arabidopsis thaliana |
AT5G49780:CDS:2 | 121 | Chr5: 20228986-20229106 | Arabidopsis thaliana |
AT5G49780:CDS:3 | 72 | Chr5: 20229184-20229255 | Arabidopsis thaliana |
AT5G49780:CDS:4 | 75 | Chr5: 20229332-20229406 | Arabidopsis thaliana |
AT5G49780:CDS:5 | 72 | Chr5: 20229492-20229563 | Arabidopsis thaliana |
AT5G49780:CDS:7 | 165 | Chr5: 20229661-20229825 | Arabidopsis thaliana |
AT5G49780:CDS:8 | 75 | Chr5: 20229926-20230000 | Arabidopsis thaliana |
AT5G49780:CDS:9 | 72 | Chr5: 20230078-20230149 | Arabidopsis thaliana |
AT5G49780:CDS:10 | 72 | Chr5: 20230230-20230301 | Arabidopsis thaliana |
AT5G49780:CDS:11 | 69 | Chr5: 20230391-20230459 | Arabidopsis thaliana |
AT5G49780:CDS:12 | 78 | Chr5: 20230553-20230630 | Arabidopsis thaliana |
AT5G49780:CDS:13 | 72 | Chr5: 20230710-20230781 | Arabidopsis thaliana |
AT5G49780:CDS:14 | 144 | Chr5: 20230883-20231026 | Arabidopsis thaliana |
AT5G49780:CDS:15 | 488 | Chr5: 20231102-20231589 | Arabidopsis thaliana |
AT5G49780:CDS:16 | 138 | Chr5: 20231674-20231811 | Arabidopsis thaliana |
AT5G49780:CDS:18 | 357 | Chr5: 20231878-20232234 | Arabidopsis thaliana |
AT5G49780:CDS:19 | 236 | Chr5: 20232303-20232538 | Arabidopsis thaliana |
AT5G49780:CDS:20 | 477 | Chr5: 20232619-20233095 | Arabidopsis thaliana |
AT5G49780:CDS:1.1 | 88 | Chr5: 20228815-20228902 | Arabidopsis thaliana |
AT5G49780:CDS:2.1 | 121 | Chr5: 20228986-20229106 | Arabidopsis thaliana |
AT5G49780:CDS:3.1 | 72 | Chr5: 20229184-20229255 | Arabidopsis thaliana |
AT5G49780:CDS:4.1 | 75 | Chr5: 20229332-20229406 | Arabidopsis thaliana |
AT5G49780:CDS:5.1 | 72 | Chr5: 20229492-20229563 | Arabidopsis thaliana |
AT5G49780:CDS:7.1 | 165 | Chr5: 20229661-20229825 | Arabidopsis thaliana |
AT5G49780:CDS:8.1 | 75 | Chr5: 20229926-20230000 | Arabidopsis thaliana |
AT5G49780:CDS:9.1 | 72 | Chr5: 20230078-20230149 | Arabidopsis thaliana |
AT5G49780:CDS:10.1 | 72 | Chr5: 20230230-20230301 | Arabidopsis thaliana |
AT5G49780:CDS:11.1 | 69 | Chr5: 20230391-20230459 | Arabidopsis thaliana |
AT5G49780:CDS:12.1 | 78 | Chr5: 20230553-20230630 | Arabidopsis thaliana |
AT5G49780:CDS:13.1 | 72 | Chr5: 20230710-20230781 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G07465:exon:1 | 389 | Chr5: 20228268-20228656 | Arabidopsis thaliana |
AT5G49780:exon:16 | 138 | Chr5: 20231674-20231811 | Arabidopsis thaliana |
AT5G49780:exon:18 | 357 | Chr5: 20231878-20232234 | Arabidopsis thaliana |
AT5G49780:exon:1 | 258 | Chr5: 20228645-20228902 | Arabidopsis thaliana |
AT5G49780:exon:2 | 121 | Chr5: 20228986-20229106 | Arabidopsis thaliana |
AT5G49780:exon:3 | 72 | Chr5: 20229184-20229255 | Arabidopsis thaliana |
AT5G49780:exon:5 | 75 | Chr5: 20229332-20229406 | Arabidopsis thaliana |
AT5G49780:exon:4 | 151 | Chr5: 20229256-20229406 | Arabidopsis thaliana |
AT5G49780:exon:6 | 72 | Chr5: 20229492-20229563 | Arabidopsis thaliana |
AT5G49780:exon:7 | 165 | Chr5: 20229661-20229825 | Arabidopsis thaliana |
AT5G49780:exon:8 | 75 | Chr5: 20229926-20230000 | Arabidopsis thaliana |
AT5G49780:exon:9 | 72 | Chr5: 20230078-20230149 | Arabidopsis thaliana |
AT5G49780:exon:10 | 72 | Chr5: 20230230-20230301 | Arabidopsis thaliana |
AT5G49780:exon:11 | 69 | Chr5: 20230391-20230459 | Arabidopsis thaliana |
AT5G49780:exon:12 | 78 | Chr5: 20230553-20230630 | Arabidopsis thaliana |
AT5G49780:exon:13 | 72 | Chr5: 20230710-20230781 | Arabidopsis thaliana |
AT5G49780:exon:14 | 144 | Chr5: 20230883-20231026 | Arabidopsis thaliana |
AT5G49780:exon:15 | 488 | Chr5: 20231102-20231589 | Arabidopsis thaliana |
AT5G49780:exon:17 | 561 | Chr5: 20231674-20232234 | Arabidopsis thaliana |
AT5G49780:exon:19 | 236 | Chr5: 20232303-20232538 | Arabidopsis thaliana |
AT5G49780:exon:20 | 477 | Chr5: 20232619-20233095 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49780:five_prime_UTR:1 | 170 | Chr5: 20228645-20228814 | Arabidopsis thaliana |
AT5G49780:five_prime_UTR:2 | 151 | Chr5: 20229256-20229406 | Arabidopsis thaliana |
AT5G49780:five_prime_UTR:3 | 7 | Chr5: 20229492-20229498 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G07465 | AT5G07465 | 389 | Chr5: 20228268-20228656 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G49780.3 | 3041 | Chr5: 20228645-20233095 |
AT5G49780.2 | 3107 | Chr5: 20228645-20233095 |
AT5G49780.1 | 2732 | Chr5: 20229256-20233095 |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1R7T3H1_ARATH A0A1R7T3H0_ARATH | similarity | Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
ATP binding | ECO |
protein kinase activity | ECO |
protein serine/threonine kinase activity | ECO |
biological process | |
protein phosphorylation | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...