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Gene : AT5G49700 A. thaliana

DB identifier  ? AT5G49700 Secondary Identifier  ? locus:2157007
Brief Description  Putative AT-hook DNA-binding family protein
TAIR Computational Description  Putative AT-hook DNA-binding family protein;(source:Araport11)
TAIR Curator Summary  AT-HOOK MOTIF NUCLEAR LOCALIZED (AHL) protein; binds to the AT-rich DNA sequences in chromosomes and regulates gene transcription related to diverse biological processes. Overexpression enhanced root hair production by increasing the transcription of genes downstream of RHD6.
TAIR Short Description  Predicted AT-hook DNA-binding family protein
TAIR Aliases  AHL17

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1642  
Location: Chr5:20192159-20193800

Gene models - AT5G49700 AT5G49700

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
AHL17_ARATH function Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
minor groove of adenine-thymine-rich DNA binding  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets