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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49430:CDS:23 | 196 | Chr5: 20037338-20037533 | Arabidopsis thaliana |
AT5G49430:CDS:22 | 59 | Chr5: 20037612-20037670 | Arabidopsis thaliana |
AT5G49430:CDS:21 | 576 | Chr5: 20037878-20038453 | Arabidopsis thaliana |
AT5G49430:CDS:20 | 1677 | Chr5: 20038545-20040221 | Arabidopsis thaliana |
AT5G49430:CDS:19 | 398 | Chr5: 20040294-20040691 | Arabidopsis thaliana |
AT5G49430:CDS:18 | 55 | Chr5: 20040787-20040841 | Arabidopsis thaliana |
AT5G49430:CDS:17 | 60 | Chr5: 20040925-20040984 | Arabidopsis thaliana |
AT5G49430:CDS:16 | 97 | Chr5: 20041293-20041389 | Arabidopsis thaliana |
AT5G49430:CDS:15 | 71 | Chr5: 20041467-20041537 | Arabidopsis thaliana |
AT5G49430:CDS:14 | 81 | Chr5: 20041617-20041697 | Arabidopsis thaliana |
AT5G49430:CDS:13 | 71 | Chr5: 20042068-20042138 | Arabidopsis thaliana |
AT5G49430:CDS:12 | 169 | Chr5: 20042237-20042405 | Arabidopsis thaliana |
AT5G49430:CDS:11 | 79 | Chr5: 20042509-20042587 | Arabidopsis thaliana |
AT5G49430:CDS:10 | 78 | Chr5: 20042688-20042765 | Arabidopsis thaliana |
AT5G49430:CDS:9 | 104 | Chr5: 20042848-20042951 | Arabidopsis thaliana |
AT5G49430:CDS:8 | 125 | Chr5: 20043070-20043194 | Arabidopsis thaliana |
AT5G49430:CDS:7 | 92 | Chr5: 20043277-20043368 | Arabidopsis thaliana |
AT5G49430:CDS:6 | 107 | Chr5: 20043721-20043827 | Arabidopsis thaliana |
AT5G49430:CDS:5 | 78 | Chr5: 20043912-20043989 | Arabidopsis thaliana |
AT5G49430:CDS:4 | 110 | Chr5: 20044078-20044187 | Arabidopsis thaliana |
AT5G49430:CDS:3 | 240 | Chr5: 20044301-20044540 | Arabidopsis thaliana |
AT5G49430:CDS:2 | 161 | Chr5: 20044755-20044915 | Arabidopsis thaliana |
AT5G49430:CDS:1 | 350 | Chr5: 20045105-20045454 | Arabidopsis thaliana |
AT5G49430:CDS:23.1 | 196 | Chr5: 20037338-20037533 | Arabidopsis thaliana |
AT5G49430:CDS:22.1 | 59 | Chr5: 20037612-20037670 | Arabidopsis thaliana |
AT5G49430:CDS:21.1 | 576 | Chr5: 20037878-20038453 | Arabidopsis thaliana |
AT5G49430:CDS:20.1 | 1677 | Chr5: 20038545-20040221 | Arabidopsis thaliana |
AT5G49430:CDS:19.1 | 398 | Chr5: 20040294-20040691 | Arabidopsis thaliana |
AT5G49430:CDS:18.1 | 55 | Chr5: 20040787-20040841 | Arabidopsis thaliana |
AT5G49430:CDS:17.1 | 60 | Chr5: 20040925-20040984 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49430:exon:27 | 546 | Chr5: 20036988-20037533 | Arabidopsis thaliana |
AT5G49430:exon:3 | 356 | Chr5: 20045105-20045460 | Arabidopsis thaliana |
AT5G49430:exon:2 | 88 | Chr5: 20046084-20046171 | Arabidopsis thaliana |
AT5G49430:exon:1 | 336 | Chr5: 20046367-20046702 | Arabidopsis thaliana |
AT5G49430:exon:26 | 485 | Chr5: 20037049-20037533 | Arabidopsis thaliana |
AT5G49430:exon:25 | 59 | Chr5: 20037612-20037670 | Arabidopsis thaliana |
AT5G49430:exon:24 | 576 | Chr5: 20037878-20038453 | Arabidopsis thaliana |
AT5G49430:exon:23 | 1677 | Chr5: 20038545-20040221 | Arabidopsis thaliana |
AT5G49430:exon:22 | 398 | Chr5: 20040294-20040691 | Arabidopsis thaliana |
AT5G49430:exon:21 | 55 | Chr5: 20040787-20040841 | Arabidopsis thaliana |
AT5G49430:exon:20 | 60 | Chr5: 20040925-20040984 | Arabidopsis thaliana |
AT5G49430:exon:19 | 97 | Chr5: 20041293-20041389 | Arabidopsis thaliana |
AT5G49430:exon:18 | 71 | Chr5: 20041467-20041537 | Arabidopsis thaliana |
AT5G49430:exon:17 | 81 | Chr5: 20041617-20041697 | Arabidopsis thaliana |
AT5G49430:exon:16 | 71 | Chr5: 20042068-20042138 | Arabidopsis thaliana |
AT5G49430:exon:15 | 169 | Chr5: 20042237-20042405 | Arabidopsis thaliana |
AT5G49430:exon:14 | 79 | Chr5: 20042509-20042587 | Arabidopsis thaliana |
AT5G49430:exon:13 | 78 | Chr5: 20042688-20042765 | Arabidopsis thaliana |
AT5G49430:exon:12 | 104 | Chr5: 20042848-20042951 | Arabidopsis thaliana |
AT5G49430:exon:11 | 125 | Chr5: 20043070-20043194 | Arabidopsis thaliana |
AT5G49430:exon:10 | 92 | Chr5: 20043277-20043368 | Arabidopsis thaliana |
AT5G49430:exon:9 | 107 | Chr5: 20043721-20043827 | Arabidopsis thaliana |
AT5G49430:exon:8 | 78 | Chr5: 20043912-20043989 | Arabidopsis thaliana |
AT5G49430:exon:7 | 110 | Chr5: 20044078-20044187 | Arabidopsis thaliana |
AT5G49430:exon:6 | 240 | Chr5: 20044301-20044540 | Arabidopsis thaliana |
AT5G49430:exon:5 | 161 | Chr5: 20044755-20044915 | Arabidopsis thaliana |
AT5G49430:exon:4 | 350 | Chr5: 20045105-20045454 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49430:five_prime_UTR:3 | 6 | Chr5: 20045455-20045460 | Arabidopsis thaliana |
AT5G49430:five_prime_UTR:2 | 88 | Chr5: 20046084-20046171 | Arabidopsis thaliana |
AT5G49430:five_prime_UTR:1 | 336 | Chr5: 20046367-20046702 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G49430.1 | 5814 | Chr5: 20036988-20046702 |
AT5G49430.2 | 5323 | Chr5: 20037049-20045454 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49430:three_prime_UTR:2 | 350 | Chr5: 20036988-20037337 | Arabidopsis thaliana |
AT5G49430:three_prime_UTR:1 | 289 | Chr5: 20037049-20037337 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...