External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G49152.2 | 3447 | Chr5: 19924322-19929377 |
AT5G49152.1 | 324 | Chr5: 19928880-19929377 |
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49150:CDS:1 | 82 | Chr5: 19924354-19924435 | Arabidopsis thaliana |
AT5G49150:CDS:2 | 336 | Chr5: 19924506-19924841 | Arabidopsis thaliana |
AT5G49150:CDS:4 | 339 | Chr5: 19924929-19925267 | Arabidopsis thaliana |
AT5G49150:CDS:5 | 327 | Chr5: 19925355-19925681 | Arabidopsis thaliana |
AT5G49150:CDS:7 | 207 | Chr5: 19925768-19925974 | Arabidopsis thaliana |
AT5G49150:CDS:8 | 56 | Chr5: 19926055-19926110 | Arabidopsis thaliana |
AT5G49150:CDS:9 | 142 | Chr5: 19926187-19926328 | Arabidopsis thaliana |
AT5G49150:CDS:10 | 309 | Chr5: 19926404-19926712 | Arabidopsis thaliana |
AT5G49150:CDS:11 | 125 | Chr5: 19926789-19926913 | Arabidopsis thaliana |
AT5G49150:CDS:12 | 218 | Chr5: 19927023-19927240 | Arabidopsis thaliana |
AT5G49150:CDS:13 | 228 | Chr5: 19927345-19927572 | Arabidopsis thaliana |
AT5G49150:CDS:14 | 230 | Chr5: 19927669-19927898 | Arabidopsis thaliana |
AT5G49150:CDS:16 | 218 | Chr5: 19927990-19928207 | Arabidopsis thaliana |
AT5G49150:CDS:17 | 157 | Chr5: 19928285-19928441 | Arabidopsis thaliana |
AT5G49150:CDS:19 | 137 | Chr5: 19928814-19928950 | Arabidopsis thaliana |
AT5G49150:CDS:21 | 117 | Chr5: 19929037-19929153 | Arabidopsis thaliana |
AT5G49150:CDS:1.1 | 82 | Chr5: 19924354-19924435 | Arabidopsis thaliana |
AT5G49150:CDS:2.1 | 336 | Chr5: 19924506-19924841 | Arabidopsis thaliana |
AT5G49150:CDS:4.1 | 339 | Chr5: 19924929-19925267 | Arabidopsis thaliana |
AT5G49150:CDS:5.1 | 327 | Chr5: 19925355-19925681 | Arabidopsis thaliana |
AT5G49150:CDS:7.1 | 207 | Chr5: 19925768-19925974 | Arabidopsis thaliana |
AT5G49150:CDS:8.1 | 56 | Chr5: 19926055-19926110 | Arabidopsis thaliana |
AT5G49150:CDS:9.1 | 142 | Chr5: 19926187-19926328 | Arabidopsis thaliana |
AT5G49150:CDS:10.1 | 309 | Chr5: 19926404-19926712 | Arabidopsis thaliana |
AT5G49150:CDS:11.1 | 125 | Chr5: 19926789-19926913 | Arabidopsis thaliana |
AT5G49150:CDS:12.1 | 218 | Chr5: 19927023-19927240 | Arabidopsis thaliana |
AT5G49150:CDS:13.1 | 228 | Chr5: 19927345-19927572 | Arabidopsis thaliana |
AT5G49150:CDS:14.1 | 230 | Chr5: 19927669-19927898 | Arabidopsis thaliana |
AT5G49150:CDS:15 | 239 | Chr5: 19927969-19928207 | Arabidopsis thaliana |
AT5G49150:CDS:17.1 | 157 | Chr5: 19928285-19928441 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49152:exon:1 | 114 | Chr5: 19924322-19924435 | Arabidopsis thaliana |
AT5G49152:exon:2 | 336 | Chr5: 19924506-19924841 | Arabidopsis thaliana |
AT5G49152:exon:3 | 339 | Chr5: 19924929-19925267 | Arabidopsis thaliana |
AT5G49152:exon:4 | 327 | Chr5: 19925355-19925681 | Arabidopsis thaliana |
AT5G49152:exon:5 | 207 | Chr5: 19925768-19925974 | Arabidopsis thaliana |
AT5G49152:exon:6 | 56 | Chr5: 19926055-19926110 | Arabidopsis thaliana |
AT5G49152:exon:7 | 142 | Chr5: 19926187-19926328 | Arabidopsis thaliana |
AT5G49152:exon:8 | 309 | Chr5: 19926404-19926712 | Arabidopsis thaliana |
AT5G49152:exon:9 | 125 | Chr5: 19926789-19926913 | Arabidopsis thaliana |
AT5G49152:exon:10 | 218 | Chr5: 19927023-19927240 | Arabidopsis thaliana |
AT5G49152:exon:11 | 228 | Chr5: 19927345-19927572 | Arabidopsis thaliana |
AT5G49152:exon:12 | 230 | Chr5: 19927669-19927898 | Arabidopsis thaliana |
AT5G49152:exon:13 | 239 | Chr5: 19927969-19928207 | Arabidopsis thaliana |
AT5G49152:exon:14 | 157 | Chr5: 19928285-19928441 | Arabidopsis thaliana |
AT5G49152:exon:15 | 30 | Chr5: 19928688-19928717 | Arabidopsis thaliana |
AT5G49152:exon:16 | 137 | Chr5: 19928814-19928950 | Arabidopsis thaliana |
AT5G49152:exon:17 | 71 | Chr5: 19928880-19928950 | Arabidopsis thaliana |
AT5G49152:exon:18 | 92 | Chr5: 19929037-19929128 | Arabidopsis thaliana |
AT5G49152:exon:19 | 161 | Chr5: 19929217-19929377 | Arabidopsis thaliana |
AT5G49150:exon:17 | 218 | Chr5: 19927990-19928207 | Arabidopsis thaliana |
AT5G49150:exon:1 | 82 | Chr5: 19924354-19924435 | Arabidopsis thaliana |
AT5G49150:exon:2 | 53 | Chr5: 19924383-19924435 | Arabidopsis thaliana |
AT5G49150:exon:3 | 336 | Chr5: 19924506-19924841 | Arabidopsis thaliana |
AT5G49150:exon:19 | 243 | Chr5: 19928285-19928527 | Arabidopsis thaliana |
AT5G49150:exon:4 | 82 | Chr5: 19924760-19924841 | Arabidopsis thaliana |
AT5G49150:exon:5 | 339 | Chr5: 19924929-19925267 | Arabidopsis thaliana |
AT5G49150:exon:6 | 327 | Chr5: 19925355-19925681 | Arabidopsis thaliana |
AT5G49150:exon:22 | 117 | Chr5: 19929037-19929153 | Arabidopsis thaliana |
AT5G49150:exon:7 | 256 | Chr5: 19925426-19925681 | Arabidopsis thaliana |
AT5G49150:exon:8 | 207 | Chr5: 19925768-19925974 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49150:five_prime_UTR:1 | 53 | Chr5: 19924383-19924435 | Arabidopsis thaliana |
AT5G49150:five_prime_UTR:2 | 254 | Chr5: 19924506-19924759 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G49152 | locus:4010714047 | AT5G49152 | 5056 | Chr5: 19924322-19929377 | A. thaliana | Natural antisense transcript overlaps with AT5G49150;(source:Araport11) | NULL | other RNA |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G49150.4 | 3228 | Chr5: 19924354-19929153 |
AT5G49150.3 | 3249 | Chr5: 19924354-19929153 |
AT5G49150.2 | 3264 | Chr5: 19924354-19929256 |
AT5G49150.1 | 3052 | Chr5: 19924383-19928527 |
AT5G49150.6 | 2913 | Chr5: 19924760-19929153 |
AT5G49150.5 | 2928 | Chr5: 19924760-19929256 |
AT5G49150.8 | 2421 | Chr5: 19925426-19929153 |
AT5G49150.7 | 2436 | Chr5: 19925426-19929256 |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
GEX2_ARATH | tissue specificity | In tricellular pollen, expressed in mature sperm cells but not in the vegetative cell. In bicellular pollen, detected in the progenitor generative cell. Detected in the egg cell within the female gametophyte. |
Function
Gene Ontology
cellular component | |
---|---|
plasma membrane | ECO |
molecular function | |
actin filament binding | ECO |
biological process | |
pollen sperm cell differentiation | ECO |
fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm | ECO |
actin cytoskeleton organization | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...