External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48790:CDS:10 | 121 | Chr5: 19780010-19780130 | Arabidopsis thaliana |
AT5G48790:CDS:9 | 118 | Chr5: 19780212-19780329 | Arabidopsis thaliana |
AT5G48790:CDS:7 | 99 | Chr5: 19780464-19780562 | Arabidopsis thaliana |
AT5G48790:CDS:6 | 193 | Chr5: 19780653-19780845 | Arabidopsis thaliana |
AT5G48790:CDS:5 | 101 | Chr5: 19780934-19781034 | Arabidopsis thaliana |
AT5G48790:CDS:4 | 40 | Chr5: 19781140-19781179 | Arabidopsis thaliana |
AT5G48790:CDS:3 | 48 | Chr5: 19781263-19781310 | Arabidopsis thaliana |
AT5G48790:CDS:2 | 156 | Chr5: 19781530-19781685 | Arabidopsis thaliana |
AT5G48790:CDS:1 | 75 | Chr5: 19781903-19781977 | Arabidopsis thaliana |
AT5G48790:CDS:8 | 134 | Chr5: 19780429-19780562 | Arabidopsis thaliana |
AT5G48790:CDS:6.1 | 193 | Chr5: 19780653-19780845 | Arabidopsis thaliana |
AT5G48790:CDS:5.1 | 101 | Chr5: 19780934-19781034 | Arabidopsis thaliana |
AT5G48790:CDS:4.1 | 40 | Chr5: 19781140-19781179 | Arabidopsis thaliana |
AT5G48790:CDS:3.1 | 48 | Chr5: 19781263-19781310 | Arabidopsis thaliana |
AT5G48790:CDS:2.1 | 156 | Chr5: 19781530-19781685 | Arabidopsis thaliana |
AT5G48790:CDS:1.1 | 75 | Chr5: 19781903-19781977 | Arabidopsis thaliana |
AT5G48790:CDS:8.1 | 134 | Chr5: 19780429-19780562 | Arabidopsis thaliana |
AT5G48790:CDS:6.2 | 193 | Chr5: 19780653-19780845 | Arabidopsis thaliana |
AT5G48790:CDS:5.2 | 101 | Chr5: 19780934-19781034 | Arabidopsis thaliana |
AT5G48790:CDS:4.2 | 40 | Chr5: 19781140-19781179 | Arabidopsis thaliana |
AT5G48790:CDS:3.2 | 48 | Chr5: 19781263-19781310 | Arabidopsis thaliana |
AT5G48790:CDS:2.2 | 156 | Chr5: 19781530-19781685 | Arabidopsis thaliana |
AT5G48790:CDS:1.2 | 75 | Chr5: 19781903-19781977 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48790:exon:11 | 118 | Chr5: 19780212-19780329 | Arabidopsis thaliana |
AT5G48790:exon:8 | 99 | Chr5: 19780464-19780562 | Arabidopsis thaliana |
AT5G48790:exon:12 | 271 | Chr5: 19779860-19780130 | Arabidopsis thaliana |
AT5G48790:exon:10 | 351 | Chr5: 19780212-19780562 | Arabidopsis thaliana |
AT5G48790:exon:1 | 164 | Chr5: 19781903-19782066 | Arabidopsis thaliana |
AT5G48790:exon:9 | 187 | Chr5: 19780376-19780562 | Arabidopsis thaliana |
AT5G48790:exon:7 | 193 | Chr5: 19780653-19780845 | Arabidopsis thaliana |
AT5G48790:exon:6 | 101 | Chr5: 19780934-19781034 | Arabidopsis thaliana |
AT5G48790:exon:5 | 40 | Chr5: 19781140-19781179 | Arabidopsis thaliana |
AT5G48790:exon:4 | 48 | Chr5: 19781263-19781310 | Arabidopsis thaliana |
AT5G48790:exon:3 | 156 | Chr5: 19781530-19781685 | Arabidopsis thaliana |
AT5G48790:exon:2 | 148 | Chr5: 19781903-19782050 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48790:five_prime_UTR:1 | 89 | Chr5: 19781978-19782066 | Arabidopsis thaliana |
AT5G48790:five_prime_UTR:2 | 73 | Chr5: 19781978-19782050 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G48790.1 | 1190 | Chr5: 19779860-19782066 |
AT5G48790.2 | 1324 | Chr5: 19779860-19782066 |
AT5G48790.3 | 873 | Chr5: 19780376-19782050 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48790:three_prime_UTR:4 | 150 | Chr5: 19779860-19780009 | Arabidopsis thaliana |
AT5G48790:three_prime_UTR:3 | 271 | Chr5: 19779860-19780130 | Arabidopsis thaliana |
AT5G48790:three_prime_UTR:2 | 217 | Chr5: 19780212-19780428 | Arabidopsis thaliana |
AT5G48790:three_prime_UTR:1 | 53 | Chr5: 19780376-19780428 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
Reset view
Show in table format
Export graph
- Click on a gene to get more info about it.
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...