External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48690:CDS:13 | 321 | Chr5: 19747270-19747590 | Arabidopsis thaliana |
AT5G48690:CDS:11 | 84 | Chr5: 19747662-19747745 | Arabidopsis thaliana |
AT5G48690:CDS:10 | 84 | Chr5: 19747812-19747895 | Arabidopsis thaliana |
AT5G48690:CDS:9 | 82 | Chr5: 19747985-19748066 | Arabidopsis thaliana |
AT5G48690:CDS:8 | 68 | Chr5: 19748144-19748211 | Arabidopsis thaliana |
AT5G48690:CDS:7 | 61 | Chr5: 19748281-19748341 | Arabidopsis thaliana |
AT5G48690:CDS:6 | 87 | Chr5: 19748424-19748510 | Arabidopsis thaliana |
AT5G48690:CDS:4 | 35 | Chr5: 19748583-19748617 | Arabidopsis thaliana |
AT5G48690:CDS:13.1 | 321 | Chr5: 19747270-19747590 | Arabidopsis thaliana |
AT5G48690:CDS:11.1 | 84 | Chr5: 19747662-19747745 | Arabidopsis thaliana |
AT5G48690:CDS:10.1 | 84 | Chr5: 19747812-19747895 | Arabidopsis thaliana |
AT5G48690:CDS:9.1 | 82 | Chr5: 19747985-19748066 | Arabidopsis thaliana |
AT5G48690:CDS:8.1 | 68 | Chr5: 19748144-19748211 | Arabidopsis thaliana |
AT5G48690:CDS:7.1 | 61 | Chr5: 19748281-19748341 | Arabidopsis thaliana |
AT5G48690:CDS:5 | 83 | Chr5: 19748428-19748510 | Arabidopsis thaliana |
AT5G48690:CDS:3 | 77 | Chr5: 19748583-19748659 | Arabidopsis thaliana |
AT5G48690:CDS:2 | 96 | Chr5: 19748744-19748839 | Arabidopsis thaliana |
AT5G48690:CDS:1 | 16 | Chr5: 19748953-19748968 | Arabidopsis thaliana |
AT5G48690:CDS:12 | 132 | Chr5: 19747614-19747745 | Arabidopsis thaliana |
AT5G48690:CDS:10.2 | 84 | Chr5: 19747812-19747895 | Arabidopsis thaliana |
AT5G48690:CDS:9.2 | 82 | Chr5: 19747985-19748066 | Arabidopsis thaliana |
AT5G48690:CDS:8.2 | 68 | Chr5: 19748144-19748211 | Arabidopsis thaliana |
AT5G48690:CDS:7.2 | 61 | Chr5: 19748281-19748341 | Arabidopsis thaliana |
AT5G48690:CDS:5.1 | 83 | Chr5: 19748428-19748510 | Arabidopsis thaliana |
AT5G48690:CDS:3.1 | 77 | Chr5: 19748583-19748659 | Arabidopsis thaliana |
AT5G48690:CDS:2.1 | 96 | Chr5: 19748744-19748839 | Arabidopsis thaliana |
AT5G48690:CDS:1.1 | 16 | Chr5: 19748953-19748968 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48690:exon:5 | 87 | Chr5: 19748424-19748510 | Arabidopsis thaliana |
AT5G48690:exon:12 | 565 | Chr5: 19747026-19747590 | Arabidopsis thaliana |
AT5G48690:exon:10 | 84 | Chr5: 19747662-19747745 | Arabidopsis thaliana |
AT5G48690:exon:11 | 720 | Chr5: 19747026-19747745 | Arabidopsis thaliana |
AT5G48690:exon:9 | 84 | Chr5: 19747812-19747895 | Arabidopsis thaliana |
AT5G48690:exon:8 | 82 | Chr5: 19747985-19748066 | Arabidopsis thaliana |
AT5G48690:exon:7 | 68 | Chr5: 19748144-19748211 | Arabidopsis thaliana |
AT5G48690:exon:6 | 61 | Chr5: 19748281-19748341 | Arabidopsis thaliana |
AT5G48690:exon:4 | 83 | Chr5: 19748428-19748510 | Arabidopsis thaliana |
AT5G48690:exon:3 | 77 | Chr5: 19748583-19748659 | Arabidopsis thaliana |
AT5G48690:exon:2 | 96 | Chr5: 19748744-19748839 | Arabidopsis thaliana |
AT5G48690:exon:1 | 109 | Chr5: 19748953-19749061 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48690:five_prime_UTR:4 | 42 | Chr5: 19748618-19748659 | Arabidopsis thaliana |
AT5G48690:five_prime_UTR:3 | 96 | Chr5: 19748744-19748839 | Arabidopsis thaliana |
AT5G48690:five_prime_UTR:2 | 109 | Chr5: 19748953-19749061 | Arabidopsis thaliana |
AT5G48690:five_prime_UTR:1 | 93 | Chr5: 19748969-19749061 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G48690.2 | 1313 | Chr5: 19747026-19749061 |
AT5G48690.1 | 1309 | Chr5: 19747026-19749061 |
AT5G48690.3 | 1380 | Chr5: 19747026-19749061 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48690:three_prime_UTR:2 | 244 | Chr5: 19747026-19747269 | Arabidopsis thaliana |
AT5G48690:three_prime_UTR:1 | 588 | Chr5: 19747026-19747613 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...