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Gene : AT5G48655 A. thaliana

DB identifier  ? AT5G48655 Secondary Identifier  ? locus:505006682
Brief Description  RING/U-box superfamily protein
TAIR Computational Description  RING/U-box superfamily protein;(source:Araport11)
TAIR Curator Summary  RING/U-box superfamily protein. SUMO- targeted ubiquitin ligase.
TAIR Short Description  RING/U-box superfamily protein
TAIR Aliases  STUbL1

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2777  
Location: Chr5:19730380-19733156 reverse strand

Gene models - AT5G48655 AT5G48655

? Gene models

Transcripts: 6  Exons: 36  Introns: 30 

Overlapping Features

? Genome features that overlap coordinates of this Gene

21 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

1 Proteins

Function

Gene Ontology

cellular component
nucleolus  ? ECO  
molecular function
SUMO binding  ? ECO  
ubiquitin protein ligase activity  ? ECO  
metal ion binding  ? ECO  
biological process
ubiquitin-dependent protein catabolic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets