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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48450:CDS:10 | 112 | Chr5: 19633114-19633225 | Arabidopsis thaliana |
AT5G48450:CDS:8 | 203 | Chr5: 19633299-19633501 | Arabidopsis thaliana |
AT5G48450:CDS:7 | 79 | Chr5: 19633578-19633656 | Arabidopsis thaliana |
AT5G48450:CDS:6 | 366 | Chr5: 19633758-19634123 | Arabidopsis thaliana |
AT5G48450:CDS:5 | 355 | Chr5: 19634252-19634606 | Arabidopsis thaliana |
AT5G48450:CDS:4 | 121 | Chr5: 19634706-19634826 | Arabidopsis thaliana |
AT5G48450:CDS:3 | 271 | Chr5: 19634923-19635193 | Arabidopsis thaliana |
AT5G48450:CDS:2 | 110 | Chr5: 19635287-19635396 | Arabidopsis thaliana |
AT5G48450:CDS:1 | 144 | Chr5: 19635469-19635612 | Arabidopsis thaliana |
AT5G48450:CDS:11 | 122 | Chr5: 19632791-19632912 | Arabidopsis thaliana |
AT5G48450:CDS:9 | 95 | Chr5: 19633131-19633225 | Arabidopsis thaliana |
AT5G48450:CDS:8.1 | 203 | Chr5: 19633299-19633501 | Arabidopsis thaliana |
AT5G48450:CDS:7.1 | 79 | Chr5: 19633578-19633656 | Arabidopsis thaliana |
AT5G48450:CDS:6.1 | 366 | Chr5: 19633758-19634123 | Arabidopsis thaliana |
AT5G48450:CDS:5.1 | 355 | Chr5: 19634252-19634606 | Arabidopsis thaliana |
AT5G48450:CDS:4.1 | 121 | Chr5: 19634706-19634826 | Arabidopsis thaliana |
AT5G48450:CDS:3.1 | 271 | Chr5: 19634923-19635193 | Arabidopsis thaliana |
AT5G48450:CDS:2.1 | 110 | Chr5: 19635287-19635396 | Arabidopsis thaliana |
AT5G48450:CDS:1.1 | 144 | Chr5: 19635469-19635612 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48440:exon:1 | 446 | Chr5: 19632330-19632775 | Arabidopsis thaliana |
AT5G07145:exon:1 | 157 | Chr5: 19632695-19632851 | Arabidopsis thaliana |
AT5G07145:exon:2 | 147 | Chr5: 19633082-19633228 | Arabidopsis thaliana |
AT5G48450:exon:12 | 523 | Chr5: 19632703-19633225 | Arabidopsis thaliana |
AT5G48450:exon:1 | 211 | Chr5: 19635469-19635679 | Arabidopsis thaliana |
AT5G48450:exon:11 | 122 | Chr5: 19632791-19632912 | Arabidopsis thaliana |
AT5G48450:exon:10 | 95 | Chr5: 19633131-19633225 | Arabidopsis thaliana |
AT5G48450:exon:9 | 203 | Chr5: 19633299-19633501 | Arabidopsis thaliana |
AT5G48450:exon:8 | 79 | Chr5: 19633578-19633656 | Arabidopsis thaliana |
AT5G48450:exon:7 | 366 | Chr5: 19633758-19634123 | Arabidopsis thaliana |
AT5G48450:exon:6 | 355 | Chr5: 19634252-19634606 | Arabidopsis thaliana |
AT5G48450:exon:5 | 121 | Chr5: 19634706-19634826 | Arabidopsis thaliana |
AT5G48450:exon:4 | 271 | Chr5: 19634923-19635193 | Arabidopsis thaliana |
AT5G48450:exon:3 | 110 | Chr5: 19635287-19635396 | Arabidopsis thaliana |
AT5G48450:exon:2 | 196 | Chr5: 19635469-19635664 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48440:five_prime_UTR:1 | 187 | Chr5: 19632589-19632775 | Arabidopsis thaliana |
AT5G48450:five_prime_UTR:1 | 67 | Chr5: 19635613-19635679 | Arabidopsis thaliana |
AT5G48450:five_prime_UTR:2 | 52 | Chr5: 19635613-19635664 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G48440 | locus:2166076 | AT5G48440 | 3118 | Chr5: 19629658-19632775 | A. thaliana | FAD-dependent oxidoreductase family protein;(source:Araport11) | NULL | FAD-dependent oxidoreductase family protein | ||
AT5G07145 | AT5G07145 | 534 | Chr5: 19632695-19633228 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G48440.1 | 1841 | Chr5: 19629658-19632775 |
AT5G48450.2 | 2239 | Chr5: 19632703-19635679 |
AT5G48450.1 | 1918 | Chr5: 19632791-19635664 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G48450:three_prime_UTR:1 | 411 | Chr5: 19632703-19633113 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
F4K1P9_ARATH A0A1P8BGY1_ARATH | similarity | Belongs to the multicopper oxidase family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
oxidoreductase activity | ECO |
copper ion binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...