help  | faq  | software  | BAR
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide

Oops!

Error: 403

Gene : AT5G48140 A. thaliana

DB identifier  ? AT5G48140 Secondary Identifier  ? locus:2164773
Brief Description  Pectin lyase-like superfamily protein
TAIR Computational Description  Pectin lyase-like superfamily protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Pectin lyase-like superfamily protein

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1863  
Location: Chr5:19518666-19520528 reverse strand

Gene models - AT5G48140 AT5G48140

? Gene models

Transcripts: 1  Exons: 4  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

5 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
Q9LUB8_ARATH similarity Belongs to the glycosyl hydrolase 28 family.

1 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
lyase activity  ? ECO  
polygalacturonase activity  ? ECO  
biological process
carbohydrate metabolic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets