help  | faq  | software  | BAR
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide

Oops!

Error: 403
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : AT5G47970 A. thaliana

DB identifier  ? AT5G47970 Secondary Identifier  ? locus:2152758
Brief Description  Aldolase-type TIM barrel family protein
TAIR Computational Description  Aldolase-type TIM barrel family protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Aldolase-type TIM barrel family protein

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3670  
Location: Chr5:19422203-19425872

Gene models - AT5G47970 AT5G47970

? Gene models

Transcripts: 3  Exons: 37  Introns: 34 

Overlapping Features

? Genome features that overlap coordinates of this Gene

20 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
Q9FI41_ARATH function Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.
Q9FI41_ARATH similarity Belongs to the dus family.

2 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
nucleus  ? ECO  
phragmoplast  ? ECO  
cytoplasm  ? ECO  
molecular function
flavin adenine dinucleotide binding  ? ECO  
tRNA dihydrouridine synthase activity  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

Error loading results. Please clear your cache and try again.
Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

5 Data Sets