help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : AT5G47420 A. thaliana

DB identifier  ? AT5G47420 Secondary Identifier  ? locus:2171559
Brief Description  Tryptophan RNA-binding attenuator protein-like protein
TAIR Computational Description  Tryptophan RNA-binding attenuator protein-like protein;(source:Araport11)
TAIR Curator Summary  PAWH2 along with PAWH1 is part of endoplasmic reticulum ubiquitin ligase complex with Arabidopsis HRD1 via interaction with EBS7. As such it plays a role in promoting protein degradation via the ERAD pathway.
TAIR Short Description  Tryptophan RNA-binding attenuator protein-like
TAIR Aliases  AtAIM24- B2, PAWH2

0 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2283  
Location: Chr5:19232784-19235066

Gene models - AT5G47420 AT5G47420

? Gene models

Transcripts: 1  Exons: 10  Introns: 9 

Overlapping Features Displayer

11 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

1 Proteins

Function

Gene Ontology

cellular component
endoplasmic reticulum  ? ECO  
Hrd1p ubiquitin ligase complex  ? ECO  
molecular function
No terms in this category.
biological process
regulation of ERAD pathway  ? ECO  
endoplasmic reticulum unfolded protein response  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets