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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 23, Exons: 17, Five Prime UTRs: 4, mRNAs: 8, Three Prime UTRs: 8, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G46490:CDS:1 |
629
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Chr5: 18850677-18851305 | Arabidopsis thaliana |
AT5G46490:CDS:6 |
1174
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Chr5: 18851396-18852569 | Arabidopsis thaliana |
AT5G46490:CDS:1.1 |
629
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Chr5: 18850677-18851305 | Arabidopsis thaliana |
AT5G46490:CDS:5 |
1117
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Chr5: 18851396-18852512 | Arabidopsis thaliana |
AT5G46490:CDS:9 |
240
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Chr5: 18852636-18852875 | Arabidopsis thaliana |
AT5G46490:CDS:2 |
578
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Chr5: 18850728-18851305 | Arabidopsis thaliana |
AT5G46490:CDS:6.1 |
1174
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Chr5: 18851396-18852569 | Arabidopsis thaliana |
AT5G46490:CDS:2.1 |
578
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Chr5: 18850728-18851305 | Arabidopsis thaliana |
AT5G46490:CDS:5.1 |
1117
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Chr5: 18851396-18852512 | Arabidopsis thaliana |
AT5G46490:CDS:9.1 |
240
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Chr5: 18852636-18852875 | Arabidopsis thaliana |
AT5G46490:CDS:2.2 |
578
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Chr5: 18850728-18851305 | Arabidopsis thaliana |
AT5G46490:CDS:6.2 |
1174
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Chr5: 18851396-18852569 | Arabidopsis thaliana |
AT5G46490:CDS:3 |
458
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Chr5: 18850848-18851305 | Arabidopsis thaliana |
AT5G46490:CDS:4 |
571
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Chr5: 18851396-18851966 | Arabidopsis thaliana |
AT5G46490:CDS:7 |
45
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Chr5: 18852374-18852418 | Arabidopsis thaliana |
AT5G46490:CDS:3.1 |
458
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Chr5: 18850848-18851305 | Arabidopsis thaliana |
AT5G46490:CDS:5.2 |
1117
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Chr5: 18851396-18852512 | Arabidopsis thaliana |
AT5G46490:CDS:9.2 |
240
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Chr5: 18852636-18852875 | Arabidopsis thaliana |
AT5G46490:CDS:3.2 |
458
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Chr5: 18850848-18851305 | Arabidopsis thaliana |
AT5G46490:CDS:5.3 |
1117
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Chr5: 18851396-18852512 | Arabidopsis thaliana |
AT5G46490:CDS:8 |
179
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Chr5: 18852636-18852814 | Arabidopsis thaliana |
AT5G46490:CDS:10 |
310
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Chr5: 18852909-18853218 | Arabidopsis thaliana |
AT5G46490:CDS:11 |
513
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Chr5: 18853331-18853843 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G46490:exon:1 |
661
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Chr5: 18850645-18851305 | Arabidopsis thaliana |
AT5G46490:exon:17 |
566
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Chr5: 18853331-18853896 | Arabidopsis thaliana |
AT5G46490:exon:8 |
1823
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Chr5: 18851396-18853218 | Arabidopsis thaliana |
AT5G46490:exon:2 |
627
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Chr5: 18850679-18851305 | Arabidopsis thaliana |
AT5G46490:exon:13 |
583
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Chr5: 18852636-18853218 | Arabidopsis thaliana |
AT5G46490:exon:16 |
537
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Chr5: 18853331-18853867 | Arabidopsis thaliana |
AT5G46490:exon:3 |
619
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Chr5: 18850687-18851305 | Arabidopsis thaliana |
AT5G46490:exon:7 |
1467
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Chr5: 18851396-18852862 | Arabidopsis thaliana |
AT5G46490:exon:5 |
571
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Chr5: 18851396-18851966 | Arabidopsis thaliana |
AT5G46490:exon:9 |
139
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Chr5: 18852374-18852512 | Arabidopsis thaliana |
AT5G46490:exon:11 |
227
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Chr5: 18852636-18852862 | Arabidopsis thaliana |
AT5G46490:exon:12 |
501
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Chr5: 18852636-18853136 | Arabidopsis thaliana |
AT5G46490:exon:4 |
530
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Chr5: 18850776-18851305 | Arabidopsis thaliana |
AT5G46490:exon:6 |
1117
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Chr5: 18851396-18852512 | Arabidopsis thaliana |
AT5G46490:exon:10 |
179
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Chr5: 18852636-18852814 | Arabidopsis thaliana |
AT5G46490:exon:14 |
310
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Chr5: 18852909-18853218 | Arabidopsis thaliana |
AT5G46490:exon:15 |
513
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Chr5: 18853331-18853843 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G46490:five_prime_UTR:1 |
32
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Chr5: 18850645-18850676 | Arabidopsis thaliana |
AT5G46490:five_prime_UTR:2 |
49
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Chr5: 18850679-18850727 | Arabidopsis thaliana |
AT5G46490:five_prime_UTR:3 |
41
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Chr5: 18850687-18850727 | Arabidopsis thaliana |
AT5G46490:five_prime_UTR:4 |
72
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Chr5: 18850776-18850847 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G46490.3 |
3050
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Chr5: 18850645-18853896 |
AT5G46490.4 |
2927
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Chr5: 18850645-18853896 |
AT5G46490.5 |
2987
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Chr5: 18850679-18853867 |
AT5G46490.6 |
2864
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Chr5: 18850679-18853867 |
AT5G46490.7 |
2086
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Chr5: 18850687-18852862 |
AT5G46490.1 |
1467
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Chr5: 18850776-18852862 |
AT5G46490.8 |
2148
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Chr5: 18850776-18853136 |
AT5G46490.2 |
2649
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Chr5: 18850776-18853843 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G46490:three_prime_UTR:8 |
566
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Chr5: 18853331-18853896 | Arabidopsis thaliana |
AT5G46490:three_prime_UTR:3 |
649
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Chr5: 18852570-18853218 | Arabidopsis thaliana |
AT5G46490:three_prime_UTR:6 |
343
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Chr5: 18852876-18853218 | Arabidopsis thaliana |
AT5G46490:three_prime_UTR:7 |
537
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Chr5: 18853331-18853867 | Arabidopsis thaliana |
AT5G46490:three_prime_UTR:2 |
293
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Chr5: 18852570-18852862 | Arabidopsis thaliana |
AT5G46490:three_prime_UTR:1 |
94
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Chr5: 18852419-18852512 | Arabidopsis thaliana |
AT5G46490:three_prime_UTR:4 |
227
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Chr5: 18852636-18852862 | Arabidopsis thaliana |
AT5G46490:three_prime_UTR:5 |
261
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Chr5: 18852876-18853136 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE67880 |
239
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Chr5: 18853600-18853838 | Arabidopsis thaliana |
AT5TE67885 |
2566
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Chr5: 18853839-18856404 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE67880:transposon_fragment:1 |
239
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Chr5: 18853600-18853838 | Arabidopsis thaliana |
AT5TE67885:transposon_fragment:1 |
2566
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Chr5: 18853839-18856404 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane
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ECO |
molecular function | |
ATP hydrolysis activity
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ECO |
ADP binding
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ECO |
biological process | |
defense response
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ECO |
signal transduction
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ECO |
Interactions
Interaction Network
Show the following interaction types:
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