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Gene : RPS6 A. thaliana

DB identifier  ? AT5G46470 Secondary Identifier  ? locus:2151506
Name  ? RESISTANT TO P. SYRINGAE 6 Brief Description  disease resistance protein (TIR-NBS-LRR class) family
TAIR Computational Description  disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)
TAIR Curator Summary  Encodes RPS6 (RESISTANT TO P. SYRINGAE 6), a member of the TIR-NBS-LRR class resistance protein. The mRNA is cell-to-cell mobile.
TAIR Short Description  disease resistance protein (TIR-NBS-LRR class) family
TAIR Aliases  RPS6

2 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 7189  
Location: Chr5:18842553-18849741

Gene models - RPS6 AT5G46470

? Gene models

Transcripts: 1  Exons: 11  Introns: 10 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
RPS6C_ARATH function Disease resistance (R) protein that specifically recognizes the hopA1 type III effector avirulence protein from Pseudomonas syringae. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth.
RPS6C_ARATH tissue specificity Ubiquitous.

1 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
ATP binding  ? ECO  
ATP hydrolysis activity  ? ECO  
NAD+ nucleotidase, cyclic ADP-ribose generating  ? ECO  
ADP binding  ? ECO  
NAD+ nucleosidase activity  ? ECO  
biological process
defense response to bacterium  ? ECO  
signal transduction  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets