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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G46190:CDS:6 | 364 | Chr5: 18723435-18723798 | Arabidopsis thaliana |
AT5G46190:CDS:4 | 56 | Chr5: 18723879-18723934 | Arabidopsis thaliana |
AT5G46190:CDS:3 | 294 | Chr5: 18724010-18724303 | Arabidopsis thaliana |
AT5G46190:CDS:2 | 738 | Chr5: 18724395-18725132 | Arabidopsis thaliana |
AT5G46190:CDS:1 | 618 | Chr5: 18725217-18725834 | Arabidopsis thaliana |
AT5G46190:CDS:7 | 132 | Chr5: 18723435-18723566 | Arabidopsis thaliana |
AT5G46190:CDS:5 | 97 | Chr5: 18723702-18723798 | Arabidopsis thaliana |
AT5G46190:CDS:4.1 | 56 | Chr5: 18723879-18723934 | Arabidopsis thaliana |
AT5G46190:CDS:3.1 | 294 | Chr5: 18724010-18724303 | Arabidopsis thaliana |
AT5G46190:CDS:2.1 | 738 | Chr5: 18724395-18725132 | Arabidopsis thaliana |
AT5G46190:CDS:1.1 | 618 | Chr5: 18725217-18725834 | Arabidopsis thaliana |
AT5G46190:CDS:7.1 | 132 | Chr5: 18723435-18723566 | Arabidopsis thaliana |
AT5G46190:CDS:5.1 | 97 | Chr5: 18723702-18723798 | Arabidopsis thaliana |
AT5G46190:CDS:4.2 | 56 | Chr5: 18723879-18723934 | Arabidopsis thaliana |
AT5G46190:CDS:3.2 | 294 | Chr5: 18724010-18724303 | Arabidopsis thaliana |
AT5G46190:CDS:2.2 | 738 | Chr5: 18724395-18725132 | Arabidopsis thaliana |
AT5G46190:CDS:1.2 | 618 | Chr5: 18725217-18725834 | Arabidopsis thaliana |
AT5G46190:CDS:7.2 | 132 | Chr5: 18723435-18723566 | Arabidopsis thaliana |
AT5G46190:CDS:5.2 | 97 | Chr5: 18723702-18723798 | Arabidopsis thaliana |
AT5G46190:CDS:4.3 | 56 | Chr5: 18723879-18723934 | Arabidopsis thaliana |
AT5G46190:CDS:3.3 | 294 | Chr5: 18724010-18724303 | Arabidopsis thaliana |
AT5G46190:CDS:2.3 | 738 | Chr5: 18724395-18725132 | Arabidopsis thaliana |
AT5G46190:CDS:1.3 | 618 | Chr5: 18725217-18725834 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G46190:exon:10 | 2047 | Chr5: 18721752-18723798 | Arabidopsis thaliana |
AT5G46190:exon:3 | 786 | Chr5: 18725217-18726002 | Arabidopsis thaliana |
AT5G46190:exon:2 | 176 | Chr5: 18726065-18726240 | Arabidopsis thaliana |
AT5G46190:exon:9 | 451 | Chr5: 18723116-18723566 | Arabidopsis thaliana |
AT5G46190:exon:8 | 97 | Chr5: 18723702-18723798 | Arabidopsis thaliana |
AT5G46190:exon:7 | 56 | Chr5: 18723879-18723934 | Arabidopsis thaliana |
AT5G46190:exon:6 | 294 | Chr5: 18724010-18724303 | Arabidopsis thaliana |
AT5G46190:exon:5 | 738 | Chr5: 18724395-18725132 | Arabidopsis thaliana |
AT5G46190:exon:4 | 646 | Chr5: 18725217-18725862 | Arabidopsis thaliana |
AT5G46190:exon:1 | 181 | Chr5: 18726069-18726249 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G46190:five_prime_UTR:3 | 168 | Chr5: 18725835-18726002 | Arabidopsis thaliana |
AT5G46190:five_prime_UTR:2 | 176 | Chr5: 18726065-18726240 | Arabidopsis thaliana |
AT5G46190:five_prime_UTR:4 | 28 | Chr5: 18725835-18725862 | Arabidopsis thaliana |
AT5G46190:five_prime_UTR:1 | 181 | Chr5: 18726069-18726249 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G46190.2 | 3962 | Chr5: 18721752-18726249 |
AT5G46190.4 | 2422 | Chr5: 18723116-18726002 |
AT5G46190.3 | 2458 | Chr5: 18723116-18726240 |
AT5G46190.1 | 2463 | Chr5: 18723116-18726249 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G46190:three_prime_UTR:2 | 1683 | Chr5: 18721752-18723434 | Arabidopsis thaliana |
AT5G46190:three_prime_UTR:1 | 319 | Chr5: 18723116-18723434 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
cytoplasm | ECO |
molecular function | |
mRNA binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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