External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45350:CDS:3 | 239 | Chr5: 18382100-18382338 | Arabidopsis thaliana |
AT5G45350:CDS:1 | 295 | Chr5: 18382560-18382854 | Arabidopsis thaliana |
AT5G45350:CDS:3.1 | 239 | Chr5: 18382100-18382338 | Arabidopsis thaliana |
AT5G45350:CDS:1.1 | 295 | Chr5: 18382560-18382854 | Arabidopsis thaliana |
AT5G45350:CDS:3.2 | 239 | Chr5: 18382100-18382338 | Arabidopsis thaliana |
AT5G45350:CDS:1.2 | 295 | Chr5: 18382560-18382854 | Arabidopsis thaliana |
AT5G45350:CDS:3.3 | 239 | Chr5: 18382100-18382338 | Arabidopsis thaliana |
AT5G45350:CDS:1.3 | 295 | Chr5: 18382560-18382854 | Arabidopsis thaliana |
AT5G45350:CDS:2 | 381 | Chr5: 18382474-18382854 | Arabidopsis thaliana |
AT5G45350:CDS:2.1 | 381 | Chr5: 18382474-18382854 | Arabidopsis thaliana |
AT5G45350:CDS:2.2 | 381 | Chr5: 18382474-18382854 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45350:exon:12 | 540 | Chr5: 18381799-18382338 | Arabidopsis thaliana |
AT5G45350:exon:1 | 412 | Chr5: 18383658-18384069 | Arabidopsis thaliana |
AT5G45350:exon:11 | 521 | Chr5: 18381818-18382338 | Arabidopsis thaliana |
AT5G45350:exon:7 | 318 | Chr5: 18382560-18382877 | Arabidopsis thaliana |
AT5G45350:exon:4 | 348 | Chr5: 18383145-18383492 | Arabidopsis thaliana |
AT5G45350:exon:10 | 502 | Chr5: 18381837-18382338 | Arabidopsis thaliana |
AT5G45350:exon:6 | 724 | Chr5: 18382560-18383283 | Arabidopsis thaliana |
AT5G45350:exon:8 | 1447 | Chr5: 18381837-18383283 | Arabidopsis thaliana |
AT5G45350:exon:5 | 139 | Chr5: 18383145-18383283 | Arabidopsis thaliana |
AT5G45350:exon:3 | 36 | Chr5: 18383658-18383693 | Arabidopsis thaliana |
AT5G45350:exon:9 | 1041 | Chr5: 18381837-18382877 | Arabidopsis thaliana |
AT5G45350:exon:2 | 50 | Chr5: 18383658-18383707 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45350:five_prime_UTR:1 | 412 | Chr5: 18383658-18384069 | Arabidopsis thaliana |
AT5G45350:five_prime_UTR:4 | 348 | Chr5: 18383145-18383492 | Arabidopsis thaliana |
AT5G45350:five_prime_UTR:6 | 429 | Chr5: 18382855-18383283 | Arabidopsis thaliana |
AT5G45350:five_prime_UTR:5 | 139 | Chr5: 18383145-18383283 | Arabidopsis thaliana |
AT5G45350:five_prime_UTR:3 | 36 | Chr5: 18383658-18383693 | Arabidopsis thaliana |
AT5G45350:five_prime_UTR:7 | 23 | Chr5: 18382855-18382877 | Arabidopsis thaliana |
AT5G45350:five_prime_UTR:2 | 50 | Chr5: 18383658-18383707 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G45350.1 | 1270 | Chr5: 18381799-18384069 |
AT5G45350.2 | 1014 | Chr5: 18381818-18383693 |
AT5G45350.6 | 1168 | Chr5: 18381837-18383492 |
AT5G45350.4 | 1262 | Chr5: 18381837-18383693 |
AT5G45350.3 | 1483 | Chr5: 18381837-18383693 |
AT5G45350.5 | 1216 | Chr5: 18381837-18383693 |
AT5G45350.7 | 1091 | Chr5: 18381837-18383707 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45350:three_prime_UTR:4 | 301 | Chr5: 18381799-18382099 | Arabidopsis thaliana |
AT5G45350:three_prime_UTR:3 | 282 | Chr5: 18381818-18382099 | Arabidopsis thaliana |
AT5G45350:three_prime_UTR:2 | 263 | Chr5: 18381837-18382099 | Arabidopsis thaliana |
AT5G45350:three_prime_UTR:1 | 637 | Chr5: 18381837-18382473 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...