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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45170:CDS:12 | 103 | Chr5: 18270555-18270657 | Arabidopsis thaliana |
AT5G45170:CDS:11 | 144 | Chr5: 18270788-18270931 | Arabidopsis thaliana |
AT5G45170:CDS:9 | 85 | Chr5: 18271024-18271108 | Arabidopsis thaliana |
AT5G45170:CDS:8 | 155 | Chr5: 18271209-18271363 | Arabidopsis thaliana |
AT5G45170:CDS:7 | 81 | Chr5: 18271583-18271663 | Arabidopsis thaliana |
AT5G45170:CDS:6 | 62 | Chr5: 18271769-18271830 | Arabidopsis thaliana |
AT5G45170:CDS:5 | 69 | Chr5: 18271940-18272008 | Arabidopsis thaliana |
AT5G45170:CDS:4 | 49 | Chr5: 18272115-18272163 | Arabidopsis thaliana |
AT5G45170:CDS:3 | 64 | Chr5: 18272548-18272611 | Arabidopsis thaliana |
AT5G45170:CDS:2 | 47 | Chr5: 18272704-18272750 | Arabidopsis thaliana |
AT5G45170:CDS:1 | 260 | Chr5: 18272870-18273129 | Arabidopsis thaliana |
AT5G45170:CDS:10 | 224 | Chr5: 18270885-18271108 | Arabidopsis thaliana |
AT5G45170:CDS:8.1 | 155 | Chr5: 18271209-18271363 | Arabidopsis thaliana |
AT5G45170:CDS:7.1 | 81 | Chr5: 18271583-18271663 | Arabidopsis thaliana |
AT5G45170:CDS:6.1 | 62 | Chr5: 18271769-18271830 | Arabidopsis thaliana |
AT5G45170:CDS:5.1 | 69 | Chr5: 18271940-18272008 | Arabidopsis thaliana |
AT5G45170:CDS:4.1 | 49 | Chr5: 18272115-18272163 | Arabidopsis thaliana |
AT5G45170:CDS:3.1 | 64 | Chr5: 18272548-18272611 | Arabidopsis thaliana |
AT5G45170:CDS:2.1 | 47 | Chr5: 18272704-18272750 | Arabidopsis thaliana |
AT5G45170:CDS:1.1 | 260 | Chr5: 18272870-18273129 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45160:exon:23 | 555 | Chr5: 18269742-18270296 | Arabidopsis thaliana |
AT5G45170:exon:14 | 372 | Chr5: 18270286-18270657 | Arabidopsis thaliana |
AT5G45170:exon:12 | 144 | Chr5: 18270788-18270931 | Arabidopsis thaliana |
AT5G45170:exon:10 | 85 | Chr5: 18271024-18271108 | Arabidopsis thaliana |
AT5G45170:exon:1 | 394 | Chr5: 18272870-18273263 | Arabidopsis thaliana |
AT5G45170:exon:13 | 336 | Chr5: 18270322-18270657 | Arabidopsis thaliana |
AT5G45170:exon:11 | 321 | Chr5: 18270788-18271108 | Arabidopsis thaliana |
AT5G45170:exon:9 | 155 | Chr5: 18271209-18271363 | Arabidopsis thaliana |
AT5G45170:exon:8 | 81 | Chr5: 18271583-18271663 | Arabidopsis thaliana |
AT5G45170:exon:7 | 62 | Chr5: 18271769-18271830 | Arabidopsis thaliana |
AT5G45170:exon:6 | 69 | Chr5: 18271940-18272008 | Arabidopsis thaliana |
AT5G45170:exon:5 | 49 | Chr5: 18272115-18272163 | Arabidopsis thaliana |
AT5G45170:exon:4 | 64 | Chr5: 18272548-18272611 | Arabidopsis thaliana |
AT5G45170:exon:3 | 47 | Chr5: 18272704-18272750 | Arabidopsis thaliana |
AT5G45170:exon:2 | 365 | Chr5: 18272870-18273234 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45170:five_prime_UTR:1 | 134 | Chr5: 18273130-18273263 | Arabidopsis thaliana |
AT5G45170:five_prime_UTR:2 | 105 | Chr5: 18273130-18273234 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G45160 | locus:2153343 | RL2 | RHD-like2 | 5681 | Chr5: 18264616-18270296 | A. thaliana | Root hair defective 3 GTP-binding protein (RHD3);(source:Araport11) | NULL | Root hair defective 3 GTP-binding protein (RHD3) | RL2 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G45160.1 | 3017 | Chr5: 18264616-18270296 |
AT5G45170.1 | 1522 | Chr5: 18270286-18273263 |
AT5G45170.2 | 1549 | Chr5: 18270322-18273234 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G45160:three_prime_UTR:1 | 261 | Chr5: 18270036-18270296 | Arabidopsis thaliana |
AT5G45170:three_prime_UTR:3 | 269 | Chr5: 18270286-18270554 | Arabidopsis thaliana |
AT5G45170:three_prime_UTR:2 | 336 | Chr5: 18270322-18270657 | Arabidopsis thaliana |
AT5G45170:three_prime_UTR:1 | 97 | Chr5: 18270788-18270884 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
hydrolase activity | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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