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Gene : AT5G44580 A. thaliana

DB identifier  ? AT5G44580 Secondary Identifier  ? locus:2152125
Brief Description  transmembrane protein
TAIR Computational Description  transmembrane protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  NULL
TAIR Aliases  PROSCOOP10

0 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1402  
Location: Chr5:17979149-17980550

Gene models - AT5G44580 AT5G44580

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SOP10_ARATH function Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (PubMed:33514716, PubMed:34535661). Inhibits root growth and regulates root meristems (PubMed:34535661). Promotes ROS production and MAPK (e.g. MPK3, MPK4 and MPK6) activation in a MIK2-dependent manner, thus leading to the up-regulation of immune-related marker genes (e.g. WRKY30, WRKY33 and CYP81F2) (PubMed:34535661).
SOP10_ARATH similarity Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
SOP10_ARATH subcellular location The precursor of SCOOP10, PROSCOOP10, accumulates at the plasma membrane and is proteolytically cleaved to release the SCOOP10 in the apoplasm.
SOP10_ARATH tissue specificity Mostly expressed in leaves and seedlings shoots, to a lower extent, in roots, but barely in flowers.

1 Proteins

Function

Gene Ontology

cellular component
plasma membrane  ? ECO  
apoplast  ? ECO  
molecular function
receptor serine/threonine kinase binding  ? ECO  
LRR domain binding  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets