help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : APS4 A. thaliana

DB identifier  ? AT5G43780 Secondary Identifier  ? locus:2170867
Brief Description  Pseudouridine synthase/archaeosine transglycosylase-like family protein
TAIR Computational Description  Pseudouridine synthase/archaeosine transglycosylase-like family protein;(source:Araport11)
TAIR Curator Summary  sulfate adenylyltransferase, ATP sulfurylase
TAIR Short Description  Pseudouridine synthase/archaeosine transglycosylase-like family protein
TAIR Aliases  APS4, ATPS4

1 Gene Rifs

1 Organism

25 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2344  
Location: Chr5:17589394-17591737 reverse strand

Gene models - APS4 AT5G43780

? Gene models

Transcripts: 1  Exons: 5  Introns: 4 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
APS4_ARATH function Sulfate adenylyltransferase. Catalyzes the first step of the sulfate assimilation pathway.
APS4_ARATH pathway Sulfur metabolism; hydrogen sulfide biosynthesis; sulfite from sulfate: step 1/3.
APS4_ARATH similarity Belongs to the sulfate adenylyltransferase family.
APS4_ARATH tissue specificity Expressed in roots and leaves.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast stroma  ? ECO  
plastid  ? ECO  
chloroplast  ? ECO  
mitochondrion  ? ECO  
molecular function
ATP binding  ? ECO  
sulfate adenylyltransferase (ATP) activity  ? ECO  
biological process
hydrogen sulfide biosynthetic process  ? ECO  
sulfate assimilation  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets