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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G43745:CDS:23 | 102 | Chr5: 17569435-17569536 | Arabidopsis thaliana |
AT5G43745:CDS:22 | 111 | Chr5: 17569621-17569731 | Arabidopsis thaliana |
AT5G43745:CDS:21 | 74 | Chr5: 17569830-17569903 | Arabidopsis thaliana |
AT5G43745:CDS:20 | 70 | Chr5: 17569989-17570058 | Arabidopsis thaliana |
AT5G43745:CDS:19 | 48 | Chr5: 17570143-17570190 | Arabidopsis thaliana |
AT5G43745:CDS:18 | 77 | Chr5: 17570267-17570343 | Arabidopsis thaliana |
AT5G43745:CDS:17 | 127 | Chr5: 17570430-17570556 | Arabidopsis thaliana |
AT5G43745:CDS:16 | 93 | Chr5: 17570634-17570726 | Arabidopsis thaliana |
AT5G43745:CDS:15 | 114 | Chr5: 17570787-17570900 | Arabidopsis thaliana |
AT5G43745:CDS:14 | 246 | Chr5: 17570992-17571237 | Arabidopsis thaliana |
AT5G43745:CDS:13 | 77 | Chr5: 17571337-17571413 | Arabidopsis thaliana |
AT5G43745:CDS:12 | 148 | Chr5: 17571512-17571659 | Arabidopsis thaliana |
AT5G43745:CDS:11 | 85 | Chr5: 17571749-17571833 | Arabidopsis thaliana |
AT5G43745:CDS:10 | 87 | Chr5: 17572169-17572255 | Arabidopsis thaliana |
AT5G43745:CDS:9 | 105 | Chr5: 17572400-17572504 | Arabidopsis thaliana |
AT5G43745:CDS:8 | 155 | Chr5: 17572592-17572746 | Arabidopsis thaliana |
AT5G43745:CDS:7 | 99 | Chr5: 17572825-17572923 | Arabidopsis thaliana |
AT5G43745:CDS:6 | 73 | Chr5: 17573046-17573118 | Arabidopsis thaliana |
AT5G43745:CDS:5 | 72 | Chr5: 17573373-17573444 | Arabidopsis thaliana |
AT5G43745:CDS:4 | 254 | Chr5: 17573866-17574119 | Arabidopsis thaliana |
AT5G43745:CDS:3 | 89 | Chr5: 17574292-17574380 | Arabidopsis thaliana |
AT5G43745:CDS:2 | 56 | Chr5: 17574448-17574503 | Arabidopsis thaliana |
AT5G43745:CDS:1 | 92 | Chr5: 17574863-17574954 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G43740:exon:3 | 3176 | Chr5: 17565973-17569148 | Arabidopsis thaliana |
AT5G43745:exon:23 | 390 | Chr5: 17569147-17569536 | Arabidopsis thaliana |
AT5G43745:exon:22 | 111 | Chr5: 17569621-17569731 | Arabidopsis thaliana |
AT5G43745:exon:21 | 74 | Chr5: 17569830-17569903 | Arabidopsis thaliana |
AT5G43745:exon:20 | 70 | Chr5: 17569989-17570058 | Arabidopsis thaliana |
AT5G43745:exon:19 | 48 | Chr5: 17570143-17570190 | Arabidopsis thaliana |
AT5G43745:exon:18 | 77 | Chr5: 17570267-17570343 | Arabidopsis thaliana |
AT5G43745:exon:17 | 127 | Chr5: 17570430-17570556 | Arabidopsis thaliana |
AT5G43745:exon:16 | 93 | Chr5: 17570634-17570726 | Arabidopsis thaliana |
AT5G43745:exon:15 | 114 | Chr5: 17570787-17570900 | Arabidopsis thaliana |
AT5G43745:exon:14 | 246 | Chr5: 17570992-17571237 | Arabidopsis thaliana |
AT5G43745:exon:13 | 77 | Chr5: 17571337-17571413 | Arabidopsis thaliana |
AT5G43745:exon:12 | 148 | Chr5: 17571512-17571659 | Arabidopsis thaliana |
AT5G43745:exon:11 | 85 | Chr5: 17571749-17571833 | Arabidopsis thaliana |
AT5G43745:exon:10 | 87 | Chr5: 17572169-17572255 | Arabidopsis thaliana |
AT5G43745:exon:9 | 105 | Chr5: 17572400-17572504 | Arabidopsis thaliana |
AT5G43745:exon:8 | 155 | Chr5: 17572592-17572746 | Arabidopsis thaliana |
AT5G43745:exon:7 | 99 | Chr5: 17572825-17572923 | Arabidopsis thaliana |
AT5G43745:exon:6 | 73 | Chr5: 17573046-17573118 | Arabidopsis thaliana |
AT5G43745:exon:5 | 72 | Chr5: 17573373-17573444 | Arabidopsis thaliana |
AT5G43745:exon:4 | 254 | Chr5: 17573866-17574119 | Arabidopsis thaliana |
AT5G43745:exon:3 | 89 | Chr5: 17574292-17574380 | Arabidopsis thaliana |
AT5G43745:exon:2 | 56 | Chr5: 17574448-17574503 | Arabidopsis thaliana |
AT5G43745:exon:1 | 189 | Chr5: 17574863-17575051 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G43745:five_prime_UTR:1 | 97 | Chr5: 17574955-17575051 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G43740 | locus:2170902 | AT5G43740 | 4452 | Chr5: 17564697-17569148 | A. thaliana | Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) | NULL | Disease resistance protein (CC-NBS-LRR class) family |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G43740.2 | 3280 | Chr5: 17564697-17569148 |
AT5G43745.1 | 2839 | Chr5: 17569147-17575051 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G43740:three_prime_UTR:2 | 550 | Chr5: 17568599-17569148 | Arabidopsis thaliana |
AT5G43745:three_prime_UTR:1 | 288 | Chr5: 17569147-17569434 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
POLL2_ARATH-2 POLL2_ARATH | similarity | Belongs to the castor/pollux (TC 1.A.1.23) family. |
Function
Gene Ontology
cellular component | |
---|---|
chloroplast envelope | ECO |
plastid membrane | ECO |
plastid | ECO |
chloroplast | ECO |
molecular function | |
No terms in this category. | |
biological process | |
monoatomic ion transport | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...