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Gene : PAF1 A. thaliana

DB identifier  ? AT5G42790 Secondary Identifier  ? locus:2165512
Name  ? proteasome alpha subunit F1 Brief Description  proteasome alpha subunit F1
TAIR Computational Description  proteasome alpha subunit F1;(source:Araport11)
TAIR Curator Summary  encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome). Negatively regulates thiol biosynthesis and arsenic tolerance.
TAIR Short Description  proteasome alpha subunit F1
TAIR Aliases  ARS5, ATPSM30, PAF1

3 Gene Rifs

1 Organism

25 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2113  
Location: Chr5:17159044-17161156 reverse strand

Gene models - PAF1 AT5G42790

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PSA1A_ARATH developmental stage Levels decrease as seedling grow (9-day-old) but is high in 3-week-old plants.
PSA1A_ARATH function The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. Negatively regulates thiol biosynthesis and arsenic tolerance.
PSA1A_ARATH similarity Belongs to the peptidase T1A family.

1 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
proteasome complex  ? ECO  
nucleus  ? ECO  
proteasome core complex, alpha-subunit complex  ? ECO  
plastid  ? ECO  
molecular function
No terms in this category.
biological process
response to arsenic-containing substance  ? ECO  
ubiquitin-dependent protein catabolic process  ? ECO  
protein catabolic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets