External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42140:CDS:9 | 136 | Chr5: 16837547-16837682 | Arabidopsis thaliana |
AT5G42140:CDS:8 | 440 | Chr5: 16837766-16838205 | Arabidopsis thaliana |
AT5G42140:CDS:7 | 147 | Chr5: 16838353-16838499 | Arabidopsis thaliana |
AT5G42140:CDS:6 | 2085 | Chr5: 16838600-16840684 | Arabidopsis thaliana |
AT5G42140:CDS:5 | 117 | Chr5: 16840770-16840886 | Arabidopsis thaliana |
AT5G42140:CDS:4 | 87 | Chr5: 16840974-16841060 | Arabidopsis thaliana |
AT5G42140:CDS:3 | 90 | Chr5: 16841176-16841265 | Arabidopsis thaliana |
AT5G42140:CDS:2 | 87 | Chr5: 16841521-16841607 | Arabidopsis thaliana |
AT5G42140:CDS:1 | 48 | Chr5: 16841938-16841985 | Arabidopsis thaliana |
AT5G42140:CDS:9.1 | 136 | Chr5: 16837547-16837682 | Arabidopsis thaliana |
AT5G42140:CDS:8.1 | 440 | Chr5: 16837766-16838205 | Arabidopsis thaliana |
AT5G42140:CDS:7.1 | 147 | Chr5: 16838353-16838499 | Arabidopsis thaliana |
AT5G42140:CDS:6.1 | 2085 | Chr5: 16838600-16840684 | Arabidopsis thaliana |
AT5G42140:CDS:5.1 | 117 | Chr5: 16840770-16840886 | Arabidopsis thaliana |
AT5G42140:CDS:4.1 | 87 | Chr5: 16840974-16841060 | Arabidopsis thaliana |
AT5G42140:CDS:3.1 | 90 | Chr5: 16841176-16841265 | Arabidopsis thaliana |
AT5G42140:CDS:2.1 | 87 | Chr5: 16841521-16841607 | Arabidopsis thaliana |
AT5G42140:CDS:1.1 | 48 | Chr5: 16841938-16841985 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42140:exon:12 | 351 | Chr5: 16837332-16837682 | Arabidopsis thaliana |
AT5G42140:exon:2 | 556 | Chr5: 16841938-16842493 | Arabidopsis thaliana |
AT5G42140:exon:11 | 343 | Chr5: 16837340-16837682 | Arabidopsis thaliana |
AT5G42140:exon:10 | 440 | Chr5: 16837766-16838205 | Arabidopsis thaliana |
AT5G42140:exon:9 | 147 | Chr5: 16838353-16838499 | Arabidopsis thaliana |
AT5G42140:exon:8 | 2085 | Chr5: 16838600-16840684 | Arabidopsis thaliana |
AT5G42140:exon:7 | 117 | Chr5: 16840770-16840886 | Arabidopsis thaliana |
AT5G42140:exon:6 | 87 | Chr5: 16840974-16841060 | Arabidopsis thaliana |
AT5G42140:exon:5 | 90 | Chr5: 16841176-16841265 | Arabidopsis thaliana |
AT5G42140:exon:4 | 87 | Chr5: 16841521-16841607 | Arabidopsis thaliana |
AT5G42140:exon:3 | 170 | Chr5: 16841938-16842107 | Arabidopsis thaliana |
AT5G42140:exon:1 | 160 | Chr5: 16842232-16842391 | Arabidopsis thaliana |
AT5G06285:exon:1 | 467 | Chr5: 16841930-16842396 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42140:five_prime_UTR:2 | 508 | Chr5: 16841986-16842493 | Arabidopsis thaliana |
AT5G42140:five_prime_UTR:3 | 122 | Chr5: 16841986-16842107 | Arabidopsis thaliana |
AT5G42140:five_prime_UTR:1 | 160 | Chr5: 16842232-16842391 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G06285 | AT5G06285 | 467 | Chr5: 16841930-16842396 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G42140.2 | 3960 | Chr5: 16837332-16842493 |
AT5G42140.1 | 3726 | Chr5: 16837340-16842391 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42140:three_prime_UTR:2 | 215 | Chr5: 16837332-16837546 | Arabidopsis thaliana |
AT5G42140:three_prime_UTR:1 | 207 | Chr5: 16837340-16837546 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
metal ion binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...