External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G41690:CDS:23 | 118 | Chr5: 16670126-16670243 | Arabidopsis thaliana |
AT5G41690:CDS:22 | 24 | Chr5: 16670356-16670379 | Arabidopsis thaliana |
AT5G41690:CDS:21 | 89 | Chr5: 16670485-16670573 | Arabidopsis thaliana |
AT5G41690:CDS:20 | 118 | Chr5: 16670673-16670790 | Arabidopsis thaliana |
AT5G41690:CDS:19 | 68 | Chr5: 16670871-16670938 | Arabidopsis thaliana |
AT5G41690:CDS:18 | 88 | Chr5: 16671108-16671195 | Arabidopsis thaliana |
AT5G41690:CDS:17 | 24 | Chr5: 16671299-16671322 | Arabidopsis thaliana |
AT5G41690:CDS:16 | 86 | Chr5: 16671441-16671526 | Arabidopsis thaliana |
AT5G41690:CDS:15 | 118 | Chr5: 16671610-16671727 | Arabidopsis thaliana |
AT5G41690:CDS:14 | 68 | Chr5: 16671807-16671874 | Arabidopsis thaliana |
AT5G41690:CDS:13 | 70 | Chr5: 16672061-16672130 | Arabidopsis thaliana |
AT5G41690:CDS:12 | 24 | Chr5: 16672236-16672259 | Arabidopsis thaliana |
AT5G41690:CDS:11 | 89 | Chr5: 16672372-16672460 | Arabidopsis thaliana |
AT5G41690:CDS:10 | 118 | Chr5: 16672567-16672684 | Arabidopsis thaliana |
AT5G41690:CDS:9 | 50 | Chr5: 16672765-16672814 | Arabidopsis thaliana |
AT5G41690:CDS:8 | 70 | Chr5: 16672992-16673061 | Arabidopsis thaliana |
AT5G41690:CDS:7 | 24 | Chr5: 16673150-16673173 | Arabidopsis thaliana |
AT5G41690:CDS:6 | 89 | Chr5: 16673271-16673359 | Arabidopsis thaliana |
AT5G41690:CDS:5 | 118 | Chr5: 16673445-16673562 | Arabidopsis thaliana |
AT5G41690:CDS:4 | 68 | Chr5: 16673632-16673699 | Arabidopsis thaliana |
AT5G41690:CDS:3 | 87 | Chr5: 16673823-16673909 | Arabidopsis thaliana |
AT5G41690:CDS:2 | 74 | Chr5: 16674002-16674075 | Arabidopsis thaliana |
AT5G41690:CDS:1 | 22 | Chr5: 16674168-16674189 | Arabidopsis thaliana |
AT5G41690:CDS:23.1 | 118 | Chr5: 16670126-16670243 | Arabidopsis thaliana |
AT5G41690:CDS:22.1 | 24 | Chr5: 16670356-16670379 | Arabidopsis thaliana |
AT5G41690:CDS:21.1 | 89 | Chr5: 16670485-16670573 | Arabidopsis thaliana |
AT5G41690:CDS:20.1 | 118 | Chr5: 16670673-16670790 | Arabidopsis thaliana |
AT5G41690:CDS:19.1 | 68 | Chr5: 16670871-16670938 | Arabidopsis thaliana |
AT5G41690:CDS:18.1 | 88 | Chr5: 16671108-16671195 | Arabidopsis thaliana |
AT5G41690:CDS:17.1 | 24 | Chr5: 16671299-16671322 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G41690:exon:4 | 999 | Chr5: 16674168-16675166 | Arabidopsis thaliana |
AT5G41690:exon:29 | 263 | Chr5: 16669981-16670243 | Arabidopsis thaliana |
AT5G41690:exon:5 | 326 | Chr5: 16674168-16674493 | Arabidopsis thaliana |
AT5G41690:exon:1 | 466 | Chr5: 16674701-16675166 | Arabidopsis thaliana |
AT5G41690:exon:28 | 243 | Chr5: 16670001-16670243 | Arabidopsis thaliana |
AT5G41690:exon:27 | 24 | Chr5: 16670356-16670379 | Arabidopsis thaliana |
AT5G41690:exon:26 | 89 | Chr5: 16670485-16670573 | Arabidopsis thaliana |
AT5G41690:exon:25 | 118 | Chr5: 16670673-16670790 | Arabidopsis thaliana |
AT5G41690:exon:24 | 68 | Chr5: 16670871-16670938 | Arabidopsis thaliana |
AT5G41690:exon:23 | 88 | Chr5: 16671108-16671195 | Arabidopsis thaliana |
AT5G41690:exon:22 | 24 | Chr5: 16671299-16671322 | Arabidopsis thaliana |
AT5G41690:exon:21 | 86 | Chr5: 16671441-16671526 | Arabidopsis thaliana |
AT5G41690:exon:20 | 118 | Chr5: 16671610-16671727 | Arabidopsis thaliana |
AT5G41690:exon:19 | 68 | Chr5: 16671807-16671874 | Arabidopsis thaliana |
AT5G41690:exon:18 | 70 | Chr5: 16672061-16672130 | Arabidopsis thaliana |
AT5G41690:exon:17 | 24 | Chr5: 16672236-16672259 | Arabidopsis thaliana |
AT5G41690:exon:16 | 89 | Chr5: 16672372-16672460 | Arabidopsis thaliana |
AT5G41690:exon:15 | 118 | Chr5: 16672567-16672684 | Arabidopsis thaliana |
AT5G41690:exon:14 | 50 | Chr5: 16672765-16672814 | Arabidopsis thaliana |
AT5G41690:exon:13 | 70 | Chr5: 16672992-16673061 | Arabidopsis thaliana |
AT5G41690:exon:12 | 24 | Chr5: 16673150-16673173 | Arabidopsis thaliana |
AT5G41690:exon:11 | 89 | Chr5: 16673271-16673359 | Arabidopsis thaliana |
AT5G41690:exon:10 | 118 | Chr5: 16673445-16673562 | Arabidopsis thaliana |
AT5G41690:exon:9 | 68 | Chr5: 16673632-16673699 | Arabidopsis thaliana |
AT5G41690:exon:8 | 87 | Chr5: 16673823-16673909 | Arabidopsis thaliana |
AT5G41690:exon:7 | 74 | Chr5: 16674002-16674075 | Arabidopsis thaliana |
AT5G41690:exon:6 | 63 | Chr5: 16674168-16674230 | Arabidopsis thaliana |
AT5G41690:exon:3 | 132 | Chr5: 16674362-16674493 | Arabidopsis thaliana |
AT5G41690:exon:2 | 266 | Chr5: 16674701-16674966 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G41690:five_prime_UTR:4 | 977 | Chr5: 16674190-16675166 | Arabidopsis thaliana |
AT5G41690:five_prime_UTR:5 | 304 | Chr5: 16674190-16674493 | Arabidopsis thaliana |
AT5G41690:five_prime_UTR:1 | 466 | Chr5: 16674701-16675166 | Arabidopsis thaliana |
AT5G41690:five_prime_UTR:6 | 41 | Chr5: 16674190-16674230 | Arabidopsis thaliana |
AT5G41690:five_prime_UTR:3 | 132 | Chr5: 16674362-16674493 | Arabidopsis thaliana |
AT5G41690:five_prime_UTR:2 | 266 | Chr5: 16674701-16674966 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G41690.2 | 2826 | Chr5: 16669981-16675166 |
AT5G41690.3 | 2619 | Chr5: 16669981-16675166 |
AT5G41690.1 | 2268 | Chr5: 16670001-16674966 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G41690:three_prime_UTR:2 | 145 | Chr5: 16669981-16670125 | Arabidopsis thaliana |
AT5G41690:three_prime_UTR:1 | 125 | Chr5: 16670001-16670125 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
U2-type prespliceosome | ECO |
U1 snRNP | ECO |
molecular function | |
mRNA binding | ECO |
U1 snRNA binding | ECO |
biological process | |
mRNA splicing, via spliceosome | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...