External Links
- Aracyc
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- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
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- Agrisera Antibodies
- ATTED-II
- T-DNA Express
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G41140:CDS:1 | 81 | Chr5: 16468726-16468806 | Arabidopsis thaliana |
AT5G41140:CDS:2 | 204 | Chr5: 16469064-16469267 | Arabidopsis thaliana |
AT5G41140:CDS:3 | 123 | Chr5: 16469344-16469466 | Arabidopsis thaliana |
AT5G41140:CDS:4 | 41 | Chr5: 16469619-16469659 | Arabidopsis thaliana |
AT5G41140:CDS:5 | 106 | Chr5: 16469746-16469851 | Arabidopsis thaliana |
AT5G41140:CDS:6 | 2007 | Chr5: 16469925-16471931 | Arabidopsis thaliana |
AT5G41140:CDS:8 | 132 | Chr5: 16472007-16472138 | Arabidopsis thaliana |
AT5G41140:CDS:9 | 71 | Chr5: 16472222-16472292 | Arabidopsis thaliana |
AT5G41140:CDS:10 | 187 | Chr5: 16472360-16472546 | Arabidopsis thaliana |
AT5G41140:CDS:1.1 | 81 | Chr5: 16468726-16468806 | Arabidopsis thaliana |
AT5G41140:CDS:2.1 | 204 | Chr5: 16469064-16469267 | Arabidopsis thaliana |
AT5G41140:CDS:3.1 | 123 | Chr5: 16469344-16469466 | Arabidopsis thaliana |
AT5G41140:CDS:4.1 | 41 | Chr5: 16469619-16469659 | Arabidopsis thaliana |
AT5G41140:CDS:5.1 | 106 | Chr5: 16469746-16469851 | Arabidopsis thaliana |
AT5G41140:CDS:6.1 | 2007 | Chr5: 16469925-16471931 | Arabidopsis thaliana |
AT5G41140:CDS:7 | 111 | Chr5: 16472007-16472117 | Arabidopsis thaliana |
AT5G41140:CDS:9.1 | 71 | Chr5: 16472222-16472292 | Arabidopsis thaliana |
AT5G41140:CDS:10.1 | 187 | Chr5: 16472360-16472546 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G41140:exon:1 | 480 | Chr5: 16468327-16468806 | Arabidopsis thaliana |
AT5G41140:exon:9 | 132 | Chr5: 16472007-16472138 | Arabidopsis thaliana |
AT5G41140:exon:2 | 463 | Chr5: 16468344-16468806 | Arabidopsis thaliana |
AT5G41140:exon:3 | 204 | Chr5: 16469064-16469267 | Arabidopsis thaliana |
AT5G41140:exon:4 | 123 | Chr5: 16469344-16469466 | Arabidopsis thaliana |
AT5G41140:exon:5 | 41 | Chr5: 16469619-16469659 | Arabidopsis thaliana |
AT5G41140:exon:6 | 106 | Chr5: 16469746-16469851 | Arabidopsis thaliana |
AT5G41140:exon:7 | 2007 | Chr5: 16469925-16471931 | Arabidopsis thaliana |
AT5G41140:exon:8 | 111 | Chr5: 16472007-16472117 | Arabidopsis thaliana |
AT5G41140:exon:10 | 71 | Chr5: 16472222-16472292 | Arabidopsis thaliana |
AT5G41140:exon:11 | 451 | Chr5: 16472360-16472810 | Arabidopsis thaliana |
AT5G41150:exon:14 | 491 | Chr5: 16472764-16473254 | Arabidopsis thaliana |
AT5G41150:exon:13 | 803 | Chr5: 16472764-16473566 | Arabidopsis thaliana |
AT5G41150:exon:12 | 484 | Chr5: 16472771-16473254 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G41140:five_prime_UTR:1 | 399 | Chr5: 16468327-16468725 | Arabidopsis thaliana |
AT5G41140:five_prime_UTR:2 | 382 | Chr5: 16468344-16468725 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G41150 | locus:2163011 | UVH1 | ULTRAVIOLET HYPERSENSITIVE 1 | 4654 | Chr5: 16472764-16477417 | A. thaliana | Restriction endonuclease, type II-like superfamily protein;(source:Araport11) | Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair and yeast Rad1 proteins | Restriction endonuclease, type II-like superfamily protein | ATRAD1, RAD1, UVH1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G41140.1 | 3615 | Chr5: 16468327-16472810 |
AT5G41140.2 | 3577 | Chr5: 16468344-16472810 |
AT5G41150.1 | 3649 | Chr5: 16472764-16477417 |
AT5G41150.3 | 3737 | Chr5: 16472764-16477417 |
AT5G41150.4 | 3438 | Chr5: 16472771-16476951 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G41140:three_prime_UTR:1 | 264 | Chr5: 16472547-16472810 | Arabidopsis thaliana |
AT5G41150:three_prime_UTR:7 | 280 | Chr5: 16472764-16473043 | Arabidopsis thaliana |
AT5G41150:three_prime_UTR:6 | 575 | Chr5: 16472764-16473338 | Arabidopsis thaliana |
AT5G41150:three_prime_UTR:5 | 484 | Chr5: 16472771-16473254 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...