External Links
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G40600:CDS:11 | 72 | Chr5: 16254907-16254978 | Arabidopsis thaliana |
AT5G40600:CDS:10 | 157 | Chr5: 16255062-16255218 | Arabidopsis thaliana |
AT5G40600:CDS:8 | 59 | Chr5: 16255336-16255394 | Arabidopsis thaliana |
AT5G40600:CDS:7 | 90 | Chr5: 16255484-16255573 | Arabidopsis thaliana |
AT5G40600:CDS:6 | 114 | Chr5: 16255654-16255767 | Arabidopsis thaliana |
AT5G40600:CDS:3 | 304 | Chr5: 16255857-16256160 | Arabidopsis thaliana |
AT5G40600:CDS:2 | 64 | Chr5: 16256540-16256603 | Arabidopsis thaliana |
AT5G40600:CDS:1 | 118 | Chr5: 16256648-16256765 | Arabidopsis thaliana |
AT5G40600:CDS:11.1 | 72 | Chr5: 16254907-16254978 | Arabidopsis thaliana |
AT5G40600:CDS:10.1 | 157 | Chr5: 16255062-16255218 | Arabidopsis thaliana |
AT5G40600:CDS:8.1 | 59 | Chr5: 16255336-16255394 | Arabidopsis thaliana |
AT5G40600:CDS:7.1 | 90 | Chr5: 16255484-16255573 | Arabidopsis thaliana |
AT5G40600:CDS:6.1 | 114 | Chr5: 16255654-16255767 | Arabidopsis thaliana |
AT5G40600:CDS:4 | 257 | Chr5: 16255857-16256113 | Arabidopsis thaliana |
AT5G40600:CDS:1.1 | 118 | Chr5: 16256648-16256765 | Arabidopsis thaliana |
AT5G40600:CDS:11.2 | 72 | Chr5: 16254907-16254978 | Arabidopsis thaliana |
AT5G40600:CDS:10.2 | 157 | Chr5: 16255062-16255218 | Arabidopsis thaliana |
AT5G40600:CDS:8.2 | 59 | Chr5: 16255336-16255394 | Arabidopsis thaliana |
AT5G40600:CDS:7.2 | 90 | Chr5: 16255484-16255573 | Arabidopsis thaliana |
AT5G40600:CDS:6.2 | 114 | Chr5: 16255654-16255767 | Arabidopsis thaliana |
AT5G40600:CDS:5 | 255 | Chr5: 16255857-16256111 | Arabidopsis thaliana |
AT5G40600:CDS:9 | 19 | Chr5: 16255211-16255229 | Arabidopsis thaliana |
AT5G40600:CDS:8.3 | 59 | Chr5: 16255336-16255394 | Arabidopsis thaliana |
AT5G40600:CDS:7.3 | 90 | Chr5: 16255484-16255573 | Arabidopsis thaliana |
AT5G40600:CDS:6.3 | 114 | Chr5: 16255654-16255767 | Arabidopsis thaliana |
AT5G40600:CDS:4.1 | 257 | Chr5: 16255857-16256113 | Arabidopsis thaliana |
AT5G40600:CDS:1.2 | 118 | Chr5: 16256648-16256765 | Arabidopsis thaliana |
AT5G40595:CDS:1 | 267 | Chr5: 16253510-16253776 | Arabidopsis thaliana |
AT5G40595:CDS:2 | 159 | Chr5: 16253921-16254079 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G40600:exon:4 | 304 | Chr5: 16255857-16256160 | Arabidopsis thaliana |
AT5G40600:exon:2 | 64 | Chr5: 16256540-16256603 | Arabidopsis thaliana |
AT5G40600:exon:10 | 157 | Chr5: 16255062-16255218 | Arabidopsis thaliana |
AT5G40600:exon:3 | 257 | Chr5: 16256206-16256462 | Arabidopsis thaliana |
AT5G40600:exon:11 | 1510 | Chr5: 16253469-16254978 | Arabidopsis thaliana |
AT5G40600:exon:9 | 168 | Chr5: 16255062-16255229 | Arabidopsis thaliana |
AT5G40600:exon:8 | 59 | Chr5: 16255336-16255394 | Arabidopsis thaliana |
AT5G40600:exon:7 | 90 | Chr5: 16255484-16255573 | Arabidopsis thaliana |
AT5G40600:exon:6 | 114 | Chr5: 16255654-16255767 | Arabidopsis thaliana |
AT5G40600:exon:5 | 257 | Chr5: 16255857-16256113 | Arabidopsis thaliana |
AT5G40600:exon:1 | 182 | Chr5: 16256648-16256829 | Arabidopsis thaliana |
AT5G40595:exon:1 | 267 | Chr5: 16253510-16253776 | Arabidopsis thaliana |
AT5G40595:exon:2 | 159 | Chr5: 16253921-16254079 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G40600:five_prime_UTR:4 | 2 | Chr5: 16256112-16256113 | Arabidopsis thaliana |
AT5G40600:five_prime_UTR:3 | 257 | Chr5: 16256206-16256462 | Arabidopsis thaliana |
AT5G40600:five_prime_UTR:2 | 182 | Chr5: 16256648-16256829 | Arabidopsis thaliana |
AT5G40600:five_prime_UTR:1 | 64 | Chr5: 16256766-16256829 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G40595 | locus:504954898 | AT5G40595 | 570 | Chr5: 16253510-16254079 | A. thaliana | hypothetical protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G40600.1 | 2480 | Chr5: 16253469-16256829 |
AT5G40600.4 | 2369 | Chr5: 16253469-16256829 |
AT5G40600.2 | 2626 | Chr5: 16253469-16256829 |
AT5G40600.3 | 2380 | Chr5: 16253469-16256829 |
AT5G40595.1 | 426 | Chr5: 16253510-16254079 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G40600:three_prime_UTR:3 | 1438 | Chr5: 16253469-16254906 | Arabidopsis thaliana |
AT5G40600:three_prime_UTR:2 | 1510 | Chr5: 16253469-16254978 | Arabidopsis thaliana |
AT5G40600:three_prime_UTR:1 | 149 | Chr5: 16255062-16255210 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...