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Gene : MYB115 A. thaliana

DB identifier  ? AT5G40360 Secondary Identifier  ? locus:2170583
Name  ? myb domain protein 115 Brief Description  myb domain protein 115
TAIR Computational Description  myb domain protein 115;(source:Araport11)
TAIR Curator Summary  Encodes a member of the MYB family of transcription factors and in involved in regulation of glucosinolate (GLS) biosynthesis. MYB115 binds to the promoters of a number of GLS biosynthetic enzymes and mutations show differences in accumulation of GLS compared to wild type.
TAIR Short Description  myb domain protein 115
TAIR Aliases  AtMYB115, MYB115

1 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1880  
Location: Chr5:16144792-16146671

Gene models - MYB115 AT5G40360

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
MY115_ARATH developmental stage Induced at the onset of the maturation phase in the endosperm at low levels in a heterogeneous repartition, particularly in the chalazal endosperm. Also detected in pollen grains.
MY115_ARATH function Transcription activator that recognizes the motif 5'-TAACGG-3' in the promoter of target genes (PubMed:27681170). Promotes vegetative-to-embryonic transition and the formation of somatic embryos from root explants in a WUS-independent manner (PubMed:18695688). Together with MYB118, activates the transcription of S-ACP-DES2/AAD2 and S-ACP-DES3/AAD3 thus promoting the biosynthesis of omega-7 monounsaturated fatty acid in seed endosperm (PubMed:27681170).
MY115_ARATH tissue specificity Accumulates in reproductive organs (e.g. flowers and siliques) (PubMed:18695688, PubMed:27681170). Expressed at very low levels in vegetative organs (PubMed:27681170).

1 Proteins

Function

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets