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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G40270:CDS:20 | 105 | Chr5: 16093394-16093498 | Arabidopsis thaliana |
AT5G40270:CDS:19 | 111 | Chr5: 16093603-16093713 | Arabidopsis thaliana |
AT5G40270:CDS:18 | 16 | Chr5: 16093822-16093837 | Arabidopsis thaliana |
AT5G40270:CDS:16 | 92 | Chr5: 16093931-16094022 | Arabidopsis thaliana |
AT5G40270:CDS:15 | 81 | Chr5: 16094108-16094188 | Arabidopsis thaliana |
AT5G40270:CDS:14 | 102 | Chr5: 16094289-16094390 | Arabidopsis thaliana |
AT5G40270:CDS:13 | 93 | Chr5: 16094468-16094560 | Arabidopsis thaliana |
AT5G40270:CDS:12 | 74 | Chr5: 16094641-16094714 | Arabidopsis thaliana |
AT5G40270:CDS:11 | 56 | Chr5: 16094787-16094842 | Arabidopsis thaliana |
AT5G40270:CDS:10 | 63 | Chr5: 16094914-16094976 | Arabidopsis thaliana |
AT5G40270:CDS:9 | 68 | Chr5: 16095097-16095164 | Arabidopsis thaliana |
AT5G40270:CDS:8 | 39 | Chr5: 16095257-16095295 | Arabidopsis thaliana |
AT5G40270:CDS:7 | 91 | Chr5: 16095455-16095545 | Arabidopsis thaliana |
AT5G40270:CDS:6 | 85 | Chr5: 16095678-16095762 | Arabidopsis thaliana |
AT5G40270:CDS:5 | 52 | Chr5: 16095837-16095888 | Arabidopsis thaliana |
AT5G40270:CDS:4 | 107 | Chr5: 16095973-16096079 | Arabidopsis thaliana |
AT5G40270:CDS:3 | 23 | Chr5: 16096313-16096335 | Arabidopsis thaliana |
AT5G40270:CDS:2 | 38 | Chr5: 16096425-16096462 | Arabidopsis thaliana |
AT5G40270:CDS:1 | 126 | Chr5: 16096968-16097093 | Arabidopsis thaliana |
AT5G40270:CDS:17 | 96 | Chr5: 16093927-16094022 | Arabidopsis thaliana |
AT5G40270:CDS:15.1 | 81 | Chr5: 16094108-16094188 | Arabidopsis thaliana |
AT5G40270:CDS:14.1 | 102 | Chr5: 16094289-16094390 | Arabidopsis thaliana |
AT5G40270:CDS:13.1 | 93 | Chr5: 16094468-16094560 | Arabidopsis thaliana |
AT5G40270:CDS:12.1 | 74 | Chr5: 16094641-16094714 | Arabidopsis thaliana |
AT5G40270:CDS:11.1 | 56 | Chr5: 16094787-16094842 | Arabidopsis thaliana |
AT5G40270:CDS:10.1 | 63 | Chr5: 16094914-16094976 | Arabidopsis thaliana |
AT5G40270:CDS:9.1 | 68 | Chr5: 16095097-16095164 | Arabidopsis thaliana |
AT5G40270:CDS:8.1 | 39 | Chr5: 16095257-16095295 | Arabidopsis thaliana |
AT5G40270:CDS:7.1 | 91 | Chr5: 16095455-16095545 | Arabidopsis thaliana |
AT5G40270:CDS:6.1 | 85 | Chr5: 16095678-16095762 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G40270:exon:22 | 464 | Chr5: 16093035-16093498 | Arabidopsis thaliana |
AT5G40270:exon:19 | 16 | Chr5: 16093822-16093837 | Arabidopsis thaliana |
AT5G40270:exon:17 | 92 | Chr5: 16093931-16094022 | Arabidopsis thaliana |
AT5G40270:exon:2 | 276 | Chr5: 16096968-16097243 | Arabidopsis thaliana |
AT5G40270:exon:21 | 411 | Chr5: 16093088-16093498 | Arabidopsis thaliana |
AT5G40270:exon:20 | 111 | Chr5: 16093603-16093713 | Arabidopsis thaliana |
AT5G40270:exon:18 | 201 | Chr5: 16093822-16094022 | Arabidopsis thaliana |
AT5G40270:exon:16 | 81 | Chr5: 16094108-16094188 | Arabidopsis thaliana |
AT5G40270:exon:15 | 102 | Chr5: 16094289-16094390 | Arabidopsis thaliana |
AT5G40270:exon:14 | 93 | Chr5: 16094468-16094560 | Arabidopsis thaliana |
AT5G40270:exon:13 | 74 | Chr5: 16094641-16094714 | Arabidopsis thaliana |
AT5G40270:exon:12 | 56 | Chr5: 16094787-16094842 | Arabidopsis thaliana |
AT5G40270:exon:11 | 63 | Chr5: 16094914-16094976 | Arabidopsis thaliana |
AT5G40270:exon:10 | 68 | Chr5: 16095097-16095164 | Arabidopsis thaliana |
AT5G40270:exon:9 | 39 | Chr5: 16095257-16095295 | Arabidopsis thaliana |
AT5G40270:exon:8 | 91 | Chr5: 16095455-16095545 | Arabidopsis thaliana |
AT5G40270:exon:7 | 85 | Chr5: 16095678-16095762 | Arabidopsis thaliana |
AT5G40270:exon:6 | 52 | Chr5: 16095837-16095888 | Arabidopsis thaliana |
AT5G40270:exon:5 | 107 | Chr5: 16095973-16096079 | Arabidopsis thaliana |
AT5G40270:exon:4 | 23 | Chr5: 16096313-16096335 | Arabidopsis thaliana |
AT5G40270:exon:3 | 38 | Chr5: 16096425-16096462 | Arabidopsis thaliana |
AT5G40270:exon:1 | 278 | Chr5: 16096968-16097245 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G40270:five_prime_UTR:2 | 150 | Chr5: 16097094-16097243 | Arabidopsis thaliana |
AT5G40270:five_prime_UTR:1 | 152 | Chr5: 16097094-16097245 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G40270.1 | 1931 | Chr5: 16093035-16097243 |
AT5G40270.2 | 1973 | Chr5: 16093088-16097245 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G40270:three_prime_UTR:4 | 359 | Chr5: 16093035-16093393 | Arabidopsis thaliana |
AT5G40270:three_prime_UTR:3 | 411 | Chr5: 16093088-16093498 | Arabidopsis thaliana |
AT5G40270:three_prime_UTR:2 | 111 | Chr5: 16093603-16093713 | Arabidopsis thaliana |
AT5G40270:three_prime_UTR:1 | 105 | Chr5: 16093822-16093926 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
plastid | ECO |
molecular function | |
No terms in this category. | |
biological process | |
chloroplast organization | ECO |
plastid translation | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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