help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : GRF3 A. thaliana
DB identifier  ? AT5G38480 Secondary Identifier  ? locus:2177386
Name  ? general regulatory factor 3 Brief Description  general regulatory factor 3
TAIR Computational Description  general regulatory factor 3;(source:Araport11)
TAIR Curator Summary  general regulatory factor, a 14-3-3 gene
TAIR Short Description  general regulatory factor 3
TAIR Aliases  GRF3, RCI1
Paste the following link
Lists
This Gene isn't in any lists. Upload a list.

6 Gene Rifs

1 Organism

52 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1918  
Location: Chr5:15409684-15411601

Gene models - GRF3 AT5G38480

? Gene models

Transcripts: 3  Exons: 16  Introns: 13 

Overlapping Features

? Genome features that overlap coordinates of this Gene

CDSs: 12, Exons: 10, Five Prime UTRs: 5, mRNAs: 3, Three Prime UTRs: 2
Show all in a table »

13 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Show proteins
Curated comments from UniProt

Type Comment Proteins
14333_ARATH-2 14333_ARATH function Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes (PubMed:16407442, PubMed:7870824, PubMed:7972511). Involved in the regulation of nutrient metabolism (PubMed:21094157, PubMed:22104211). Reciprocal negative transcription regulation of miR396 (PubMed:22751317). Negative regulator of constitutive freezing tolerance and cold acclimation by controlling cold-induced gene expression partially through an ethylene (ET)-dependent pathway; prevents ethylene (ET) biosynthesis, probably by binding 1-aminocyclopropane-1-carboxylate synthases (ACS) to reduce their stability, thus contributing to establish adequate ET levels under both standard and low-temperature conditions (PubMed:25122152).
14333_ARATH-2 14333_ARATH similarity Belongs to the 14-3-3 family.
14333_ARATH-2 14333_ARATH subcellular location Translocates from the cytosol to the nucleus when phosphorylated.

2 Proteins

Function

Gene Ontology

cellular component
plasmodesma  ? ECO  
plant-type vacuole  ? ECO  
Golgi apparatus  ? ECO  
cytosol  ? ECO  
plasma membrane  ? ECO  
nucleus  ? ECO  
plant-type cell wall  ? ECO  
plastid  ? ECO  
chloroplast  ? ECO  
cytoplasm  ? ECO  
mitochondrion  ? ECO  
molecular function
ATP binding  ? ECO  
biological process
cellular response to phosphate starvation  ? ECO  
response to freezing  ? ECO  
cellular response to nitrogen starvation  ? ECO  
cold acclimation  ? ECO  
cellular response to potassium ion starvation  ? ECO  
ethylene-activated signaling pathway  ? ECO  
response to cold  ? ECO  
regulation of metabolic process  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets






BAR logo CAGEF logo CAGEF logo Araport logo JCVI logo TACC logo

InterMine is funded by the and interoperation is funded by

© 2002 - 2021 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom