External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 17, Exons: 13, Five Prime UTRs: 3, mRNAs: 3, Three Prime UTRs: 4, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G38360:CDS:5 | 74 | Chr5: 15332700-15332773 | Arabidopsis thaliana |
AT5G38360:CDS:3 | 133 | Chr5: 15332858-15332990 | Arabidopsis thaliana |
AT5G38360:CDS:2 | 45 | Chr5: 15333074-15333118 | Arabidopsis thaliana |
AT5G38360:CDS:1 | 315 | Chr5: 15333242-15333556 | Arabidopsis thaliana |
AT5G38360:CDS:7 | 73 | Chr5: 15332532-15332604 | Arabidopsis thaliana |
AT5G38360:CDS:4 | 70 | Chr5: 15332704-15332773 | Arabidopsis thaliana |
AT5G38360:CDS:3.1 | 133 | Chr5: 15332858-15332990 | Arabidopsis thaliana |
AT5G38360:CDS:2.1 | 45 | Chr5: 15333074-15333118 | Arabidopsis thaliana |
AT5G38360:CDS:1.1 | 315 | Chr5: 15333242-15333556 | Arabidopsis thaliana |
AT5G38360:CDS:10 | 165 | Chr5: 15331917-15332081 | Arabidopsis thaliana |
AT5G38360:CDS:9 | 139 | Chr5: 15332167-15332305 | Arabidopsis thaliana |
AT5G38360:CDS:8 | 98 | Chr5: 15332391-15332488 | Arabidopsis thaliana |
AT5G38360:CDS:6 | 49 | Chr5: 15332556-15332604 | Arabidopsis thaliana |
AT5G38360:CDS:4.1 | 70 | Chr5: 15332704-15332773 | Arabidopsis thaliana |
AT5G38360:CDS:3.2 | 133 | Chr5: 15332858-15332990 | Arabidopsis thaliana |
AT5G38360:CDS:2.2 | 45 | Chr5: 15333074-15333118 | Arabidopsis thaliana |
AT5G38360:CDS:1.2 | 315 | Chr5: 15333242-15333556 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G38360:exon:8 | 383 | Chr5: 15332391-15332773 | Arabidopsis thaliana |
AT5G38360:exon:2 | 388 | Chr5: 15333242-15333629 | Arabidopsis thaliana |
AT5G38360:exon:13 | 371 | Chr5: 15331711-15332081 | Arabidopsis thaliana |
AT5G38360:exon:9 | 214 | Chr5: 15332391-15332604 | Arabidopsis thaliana |
AT5G38360:exon:1 | 400 | Chr5: 15333242-15333641 | Arabidopsis thaliana |
AT5G38360:exon:12 | 165 | Chr5: 15331917-15332081 | Arabidopsis thaliana |
AT5G38360:exon:11 | 139 | Chr5: 15332167-15332305 | Arabidopsis thaliana |
AT5G38360:exon:10 | 98 | Chr5: 15332391-15332488 | Arabidopsis thaliana |
AT5G38360:exon:7 | 49 | Chr5: 15332556-15332604 | Arabidopsis thaliana |
AT5G38360:exon:6 | 70 | Chr5: 15332704-15332773 | Arabidopsis thaliana |
AT5G38360:exon:5 | 133 | Chr5: 15332858-15332990 | Arabidopsis thaliana |
AT5G38360:exon:4 | 45 | Chr5: 15333074-15333118 | Arabidopsis thaliana |
AT5G38360:exon:3 | 384 | Chr5: 15333242-15333625 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G38360:five_prime_UTR:2 | 73 | Chr5: 15333557-15333629 | Arabidopsis thaliana |
AT5G38360:five_prime_UTR:1 | 85 | Chr5: 15333557-15333641 | Arabidopsis thaliana |
AT5G38360:five_prime_UTR:3 | 69 | Chr5: 15333557-15333625 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G38360.2 | 1459 | Chr5: 15331711-15333629 |
AT5G38360.3 | 1372 | Chr5: 15331711-15333641 |
AT5G38360.1 | 1083 | Chr5: 15331917-15333625 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G38360:three_prime_UTR:1 | 309 | Chr5: 15332391-15332699 | Arabidopsis thaliana |
AT5G38360:three_prime_UTR:4 | 371 | Chr5: 15331711-15332081 | Arabidopsis thaliana |
AT5G38360:three_prime_UTR:3 | 139 | Chr5: 15332167-15332305 | Arabidopsis thaliana |
AT5G38360:three_prime_UTR:2 | 141 | Chr5: 15332391-15332531 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE55480 | 59 | Chr5: 15333581-15333639 | Arabidopsis thaliana |
AT5TE55485 | 394 | Chr5: 15333640-15334033 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE55480:transposon_fragment:1 | 59 | Chr5: 15333581-15333639 | Arabidopsis thaliana |
AT5TE55485:transposon_fragment:1 | 394 | Chr5: 15333640-15334033 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...