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Gene : AT5G36260 A. thaliana

DB identifier  ? AT5G36260 Secondary Identifier  ? locus:2183617
Brief Description  Eukaryotic aspartyl protease family protein
TAIR Computational Description  Eukaryotic aspartyl protease family protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Eukaryotic aspartyl protease family protein
TAIR Aliases  A36

1 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3578  
Location: Chr5:14284832-14288409 reverse strand

Gene models - AT5G36260 AT5G36260

? Gene models

Transcripts: 1  Exons: 10  Introns: 9 

Overlapping Features

? Genome features that overlap coordinates of this Gene

11 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ASP36_ARATH developmental stage In flowers, expressed exclusively in the pollen and growing pollen tubes (PubMed:27872247). During microspore development, confined to tricellular pollen (PubMed:27872247).
ASP36_ARATH function Displays aspartic proteolytic activity (PubMed:27872247). Together with A39, contributes to pollen and ovule development, including the apical cell wall constitution of the growing pollen tubes (PubMed:27872247).
ASP36_ARATH similarity Belongs to the peptidase A1 family.
ASP36_ARATH subcellular location Displays punctate cytosolic localization and colocalizes with the GPI-anchored protein COBL10 at the plasma membrane and in the cytosol (PubMed:27872247). In pollen grains, mainly present at the plasma membrane and in reticular structures in the cytosol (PubMed:27872247). In pollen tubes, exhibits a punctate localization in the cytosol and occurs weakly at the plasma membrane (PubMed:27872247).
ASP36_ARATH tissue specificity Highly expressed in pollen and pollen tubes (PubMed:27872247). Mostly expressed in roots, flowers and inflorescence, and at lower levels in stems, seedlings and siliques (PubMed:27872247).

1 Proteins

Function

Gene Ontology

cellular component
pollen tube  ? ECO  
cytosol  ? ECO  
plasma membrane  ? ECO  
cytoplasm  ? ECO  
side of membrane  ? ECO  
molecular function
aspartic-type endopeptidase activity  ? ECO  
biological process
pollen tube guidance  ? ECO  
proteolysis  ? ECO  
pollen development  ? ECO  
pollen germination  ? ECO  
protein catabolic process  ? ECO  
pollen tube growth  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets