External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G28080:CDS:9 | 756 | Chr5: 10090217-10090972 | Arabidopsis thaliana |
AT5G28080:CDS:7 | 158 | Chr5: 10091052-10091209 | Arabidopsis thaliana |
AT5G28080:CDS:6 | 221 | Chr5: 10091297-10091517 | Arabidopsis thaliana |
AT5G28080:CDS:5 | 86 | Chr5: 10091594-10091679 | Arabidopsis thaliana |
AT5G28080:CDS:9.1 | 756 | Chr5: 10090217-10090972 | Arabidopsis thaliana |
AT5G28080:CDS:7.1 | 158 | Chr5: 10091052-10091209 | Arabidopsis thaliana |
AT5G28080:CDS:6.1 | 221 | Chr5: 10091297-10091517 | Arabidopsis thaliana |
AT5G28080:CDS:3 | 228 | Chr5: 10091594-10091821 | Arabidopsis thaliana |
AT5G28080:CDS:2 | 38 | Chr5: 10092173-10092210 | Arabidopsis thaliana |
AT5G28080:CDS:1 | 78 | Chr5: 10092315-10092392 | Arabidopsis thaliana |
AT5G28080:CDS:9.2 | 756 | Chr5: 10090217-10090972 | Arabidopsis thaliana |
AT5G28080:CDS:7.2 | 158 | Chr5: 10091052-10091209 | Arabidopsis thaliana |
AT5G28080:CDS:6.2 | 221 | Chr5: 10091297-10091517 | Arabidopsis thaliana |
AT5G28080:CDS:5.1 | 86 | Chr5: 10091594-10091679 | Arabidopsis thaliana |
AT5G28080:CDS:9.3 | 756 | Chr5: 10090217-10090972 | Arabidopsis thaliana |
AT5G28080:CDS:7.3 | 158 | Chr5: 10091052-10091209 | Arabidopsis thaliana |
AT5G28080:CDS:6.3 | 221 | Chr5: 10091297-10091517 | Arabidopsis thaliana |
AT5G28080:CDS:5.2 | 86 | Chr5: 10091594-10091679 | Arabidopsis thaliana |
AT5G28080:CDS:9.4 | 756 | Chr5: 10090217-10090972 | Arabidopsis thaliana |
AT5G28080:CDS:7.4 | 158 | Chr5: 10091052-10091209 | Arabidopsis thaliana |
AT5G28080:CDS:6.4 | 221 | Chr5: 10091297-10091517 | Arabidopsis thaliana |
AT5G28080:CDS:5.3 | 86 | Chr5: 10091594-10091679 | Arabidopsis thaliana |
AT5G28080:CDS:9.5 | 756 | Chr5: 10090217-10090972 | Arabidopsis thaliana |
AT5G28080:CDS:7.5 | 158 | Chr5: 10091052-10091209 | Arabidopsis thaliana |
AT5G28080:CDS:6.5 | 221 | Chr5: 10091297-10091517 | Arabidopsis thaliana |
AT5G28080:CDS:5.4 | 86 | Chr5: 10091594-10091679 | Arabidopsis thaliana |
AT5G28080:CDS:9.6 | 756 | Chr5: 10090217-10090972 | Arabidopsis thaliana |
AT5G28080:CDS:8 | 144 | Chr5: 10091052-10091195 | Arabidopsis thaliana |
AT5G28080:CDS:9.7 | 756 | Chr5: 10090217-10090972 | Arabidopsis thaliana |
AT5G28080:CDS:7.6 | 158 | Chr5: 10091052-10091209 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G28080:exon:4 | 38 | Chr5: 10092173-10092210 | Arabidopsis thaliana |
AT5G28080:exon:8 | 228 | Chr5: 10091594-10091821 | Arabidopsis thaliana |
AT5G28080:exon:2 | 549 | Chr5: 10092173-10092721 | Arabidopsis thaliana |
AT5G28080:exon:5 | 1128 | Chr5: 10091594-10092721 | Arabidopsis thaliana |
AT5G28080:exon:15 | 978 | Chr5: 10089995-10090972 | Arabidopsis thaliana |
AT5G28080:exon:7 | 617 | Chr5: 10091594-10092210 | Arabidopsis thaliana |
AT5G28080:exon:3 | 514 | Chr5: 10092173-10092686 | Arabidopsis thaliana |
AT5G28080:exon:14 | 971 | Chr5: 10090002-10090972 | Arabidopsis thaliana |
AT5G28080:exon:11 | 466 | Chr5: 10091052-10091517 | Arabidopsis thaliana |
AT5G28080:exon:6 | 1093 | Chr5: 10091594-10092686 | Arabidopsis thaliana |
AT5G28080:exon:13 | 959 | Chr5: 10090014-10090972 | Arabidopsis thaliana |
AT5G28080:exon:12 | 158 | Chr5: 10091052-10091209 | Arabidopsis thaliana |
AT5G28080:exon:10 | 221 | Chr5: 10091297-10091517 | Arabidopsis thaliana |
AT5G28080:exon:9 | 155 | Chr5: 10091594-10091748 | Arabidopsis thaliana |
AT5G28080:exon:1 | 407 | Chr5: 10092315-10092721 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G28080:five_prime_UTR:5 | 38 | Chr5: 10092173-10092210 | Arabidopsis thaliana |
AT5G28080:five_prime_UTR:8 | 142 | Chr5: 10091680-10091821 | Arabidopsis thaliana |
AT5G28080:five_prime_UTR:3 | 549 | Chr5: 10092173-10092721 | Arabidopsis thaliana |
AT5G28080:five_prime_UTR:6 | 1042 | Chr5: 10091680-10092721 | Arabidopsis thaliana |
AT5G28080:five_prime_UTR:7 | 531 | Chr5: 10091680-10092210 | Arabidopsis thaliana |
AT5G28080:five_prime_UTR:2 | 407 | Chr5: 10092315-10092721 | Arabidopsis thaliana |
AT5G28080:five_prime_UTR:9 | 69 | Chr5: 10091680-10091748 | Arabidopsis thaliana |
AT5G28080:five_prime_UTR:4 | 514 | Chr5: 10092173-10092686 | Arabidopsis thaliana |
AT5G28080:five_prime_UTR:11 | 322 | Chr5: 10091196-10091517 | Arabidopsis thaliana |
AT5G28080:five_prime_UTR:10 | 1093 | Chr5: 10091594-10092686 | Arabidopsis thaliana |
AT5G28080:five_prime_UTR:1 | 329 | Chr5: 10092393-10092721 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G28080.6 | 1957 | Chr5: 10089995-10092721 |
AT5G28080.2 | 2030 | Chr5: 10089995-10092721 |
AT5G28080.5 | 2134 | Chr5: 10089995-10092721 |
AT5G28080.3 | 2485 | Chr5: 10089995-10092721 |
AT5G28080.4 | 2381 | Chr5: 10089995-10092721 |
AT5G28080.7 | 2019 | Chr5: 10090002-10092686 |
AT5G28080.1 | 2530 | Chr5: 10090002-10092686 |
AT5G28080.8 | 1900 | Chr5: 10090014-10092721 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G28080:three_prime_UTR:3 | 222 | Chr5: 10089995-10090216 | Arabidopsis thaliana |
AT5G28080:three_prime_UTR:2 | 215 | Chr5: 10090002-10090216 | Arabidopsis thaliana |
AT5G28080:three_prime_UTR:1 | 203 | Chr5: 10090014-10090216 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
WNK9_ARATH | function | May regulate flowering time by modulating the photoperiod pathway. |
WNK9_ARATH | similarity | Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
ATP binding | ECO |
histone H2AS1 kinase activity | ECO |
protein serine kinase activity | ECO |
protein kinase activity | ECO |
biological process | |
protein phosphorylation | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...