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Gene : AT5G28050 A. thaliana

DB identifier  ? AT5G28050 Secondary Identifier  ? locus:2143774
Brief Description  Cytidine/deoxycytidylate deaminase family protein
TAIR Computational Description  Cytidine/deoxycytidylate deaminase family protein;(source:Araport11)
TAIR Curator Summary  Specifically deaminates (de)guanosine to produce xanthosine with high specificity, which is further converted to xanthine, a key intermediate in purine metabolism and nitrogen recycling.
TAIR Short Description  Cytidine/deoxycytidylate deaminase family protein
TAIR Aliases  GSDA

1 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2193  
Location: Chr5:10043907-10046099 reverse strand

Gene models - AT5G28050 AT5G28050

? Gene models

Transcripts: 3  Exons: 16  Introns: 13 

Overlapping Features

? Genome features that overlap coordinates of this Gene

13 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
GSDA_ARATH function Catalyzes the hydrolytic deamination of guanosine, producing xanthosine and ammonia. Deaminates exclusively guanosine and 2'-deoxyguanosine but no other aminated purines, pyrimidines, or pterines. Deamination of guanosine by GSDA is the only source of xanthosine production in Arabidopsis.
GSDA_ARATH similarity Belongs to the cytidine and deoxycytidylate deaminase family.
GSDA_ARATH subcellular location Localizes predominantly to the nucleus.
GSDA_ARATH tissue specificity Expressed in roots, leaves, flowers and siliques.

3 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
cytoplasm  ? ECO  
molecular function
zinc ion binding  ? ECO  
guanosine deaminase activity  ? ECO  
biological process
purine nucleoside catabolic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets