External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G25770:CDS:15 | 105 | Chr5: 8969308-8969412 | Arabidopsis thaliana |
AT5G25770:CDS:14 | 98 | Chr5: 8969498-8969595 | Arabidopsis thaliana |
AT5G25770:CDS:13 | 147 | Chr5: 8969673-8969819 | Arabidopsis thaliana |
AT5G25770:CDS:12 | 70 | Chr5: 8969918-8969987 | Arabidopsis thaliana |
AT5G25770:CDS:11 | 71 | Chr5: 8970095-8970165 | Arabidopsis thaliana |
AT5G25770:CDS:10 | 91 | Chr5: 8970253-8970343 | Arabidopsis thaliana |
AT5G25770:CDS:9 | 54 | Chr5: 8970426-8970479 | Arabidopsis thaliana |
AT5G25770:CDS:8 | 87 | Chr5: 8970584-8970670 | Arabidopsis thaliana |
AT5G25770:CDS:7 | 129 | Chr5: 8970763-8970891 | Arabidopsis thaliana |
AT5G25770:CDS:6 | 81 | Chr5: 8970979-8971059 | Arabidopsis thaliana |
AT5G25770:CDS:5 | 71 | Chr5: 8971136-8971206 | Arabidopsis thaliana |
AT5G25770:CDS:3 | 119 | Chr5: 8971311-8971429 | Arabidopsis thaliana |
AT5G25770:CDS:1 | 134 | Chr5: 8971673-8971806 | Arabidopsis thaliana |
AT5G25770:CDS:15.1 | 105 | Chr5: 8969308-8969412 | Arabidopsis thaliana |
AT5G25770:CDS:14.1 | 98 | Chr5: 8969498-8969595 | Arabidopsis thaliana |
AT5G25770:CDS:13.1 | 147 | Chr5: 8969673-8969819 | Arabidopsis thaliana |
AT5G25770:CDS:12.1 | 70 | Chr5: 8969918-8969987 | Arabidopsis thaliana |
AT5G25770:CDS:11.1 | 71 | Chr5: 8970095-8970165 | Arabidopsis thaliana |
AT5G25770:CDS:10.1 | 91 | Chr5: 8970253-8970343 | Arabidopsis thaliana |
AT5G25770:CDS:9.1 | 54 | Chr5: 8970426-8970479 | Arabidopsis thaliana |
AT5G25770:CDS:8.1 | 87 | Chr5: 8970584-8970670 | Arabidopsis thaliana |
AT5G25770:CDS:7.1 | 129 | Chr5: 8970763-8970891 | Arabidopsis thaliana |
AT5G25770:CDS:6.1 | 81 | Chr5: 8970979-8971059 | Arabidopsis thaliana |
AT5G25770:CDS:5.1 | 71 | Chr5: 8971136-8971206 | Arabidopsis thaliana |
AT5G25770:CDS:4 | 79 | Chr5: 8971311-8971389 | Arabidopsis thaliana |
AT5G25770:CDS:15.2 | 105 | Chr5: 8969308-8969412 | Arabidopsis thaliana |
AT5G25770:CDS:14.2 | 98 | Chr5: 8969498-8969595 | Arabidopsis thaliana |
AT5G25770:CDS:13.2 | 147 | Chr5: 8969673-8969819 | Arabidopsis thaliana |
AT5G25770:CDS:12.2 | 70 | Chr5: 8969918-8969987 | Arabidopsis thaliana |
AT5G25770:CDS:11.2 | 71 | Chr5: 8970095-8970165 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G25760:exon:6 | 265 | Chr5: 8969085-8969349 | Arabidopsis thaliana |
AT5G25760:exon:7 | 285 | Chr5: 8969085-8969369 | Arabidopsis thaliana |
AT5G25770:exon:5 | 119 | Chr5: 8971311-8971429 | Arabidopsis thaliana |
AT5G25770:exon:3 | 519 | Chr5: 8971311-8971829 | Arabidopsis thaliana |
AT5G25770:exon:16 | 198 | Chr5: 8969215-8969412 | Arabidopsis thaliana |
AT5G25770:exon:15 | 98 | Chr5: 8969498-8969595 | Arabidopsis thaliana |
AT5G25770:exon:14 | 147 | Chr5: 8969673-8969819 | Arabidopsis thaliana |
AT5G25770:exon:13 | 70 | Chr5: 8969918-8969987 | Arabidopsis thaliana |
AT5G25770:exon:12 | 71 | Chr5: 8970095-8970165 | Arabidopsis thaliana |
AT5G25770:exon:11 | 91 | Chr5: 8970253-8970343 | Arabidopsis thaliana |
AT5G25770:exon:10 | 54 | Chr5: 8970426-8970479 | Arabidopsis thaliana |
AT5G25770:exon:9 | 87 | Chr5: 8970584-8970670 | Arabidopsis thaliana |
AT5G25770:exon:8 | 129 | Chr5: 8970763-8970891 | Arabidopsis thaliana |
AT5G25770:exon:7 | 81 | Chr5: 8970979-8971059 | Arabidopsis thaliana |
AT5G25770:exon:6 | 71 | Chr5: 8971136-8971206 | Arabidopsis thaliana |
AT5G25770:exon:4 | 128 | Chr5: 8971311-8971438 | Arabidopsis thaliana |
AT5G25770:exon:2 | 157 | Chr5: 8971673-8971829 | Arabidopsis thaliana |
AT5G25770:exon:1 | 215 | Chr5: 8971911-8972125 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G25770:five_prime_UTR:3 | 440 | Chr5: 8971390-8971829 | Arabidopsis thaliana |
AT5G25770:five_prime_UTR:2 | 23 | Chr5: 8971807-8971829 | Arabidopsis thaliana |
AT5G25770:five_prime_UTR:1 | 215 | Chr5: 8971911-8972125 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G25760 | locus:2145269 | PEX4 | peroxin4 | 1715 | Chr5: 8967655-8969369 | A. thaliana | peroxin4;(source:Araport11) | mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes. | peroxin4 | APEM7, PEX4, UBC21 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G25760.1 | 745 | Chr5: 8967655-8969349 |
AT5G25760.2 | 958 | Chr5: 8967695-8969369 |
AT5G25770.2 | 1588 | Chr5: 8969215-8972125 |
AT5G25770.1 | 1831 | Chr5: 8969215-8972125 |
AT5G25770.3 | 1597 | Chr5: 8969215-8972125 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G25760:three_prime_UTR:1 | 176 | Chr5: 8969174-8969349 | Arabidopsis thaliana |
AT5G25760:three_prime_UTR:2 | 196 | Chr5: 8969174-8969369 | Arabidopsis thaliana |
AT5G25770:three_prime_UTR:1 | 93 | Chr5: 8969215-8969307 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Error loading results. Please clear your cache and try again.
Show the following interaction types:
Reset view
Show in table format
Export graph
- Click on a gene to get more info about it.
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...