External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G25520:CDS:1 | 2027 | Chr5: 8885550-8887576 | Arabidopsis thaliana |
AT5G25520:CDS:2 | 121 | Chr5: 8887836-8887956 | Arabidopsis thaliana |
AT5G25520:CDS:4 | 60 | Chr5: 8888098-8888157 | Arabidopsis thaliana |
AT5G25520:CDS:1.1 | 2027 | Chr5: 8885550-8887576 | Arabidopsis thaliana |
AT5G25520:CDS:2.1 | 121 | Chr5: 8887836-8887956 | Arabidopsis thaliana |
AT5G25520:CDS:4.1 | 60 | Chr5: 8888098-8888157 | Arabidopsis thaliana |
AT5G25520:CDS:1.2 | 2027 | Chr5: 8885550-8887576 | Arabidopsis thaliana |
AT5G25520:CDS:2.2 | 121 | Chr5: 8887836-8887956 | Arabidopsis thaliana |
AT5G25520:CDS:4.2 | 60 | Chr5: 8888098-8888157 | Arabidopsis thaliana |
AT5G25520:CDS:1.3 | 2027 | Chr5: 8885550-8887576 | Arabidopsis thaliana |
AT5G25520:CDS:3 | 322 | Chr5: 8887836-8888157 | Arabidopsis thaliana |
AT5G25520:CDS:1.4 | 2027 | Chr5: 8885550-8887576 | Arabidopsis thaliana |
AT5G25520:CDS:2.3 | 121 | Chr5: 8887836-8887956 | Arabidopsis thaliana |
AT5G25520:CDS:5 | 60 | Chr5: 8888531-8888590 | Arabidopsis thaliana |
AT5G25520:CDS:6 | 816 | Chr5: 8888669-8889484 | Arabidopsis thaliana |
AT5G25520:CDS:1.5 | 2027 | Chr5: 8885550-8887576 | Arabidopsis thaliana |
AT5G25520:CDS:2.4 | 121 | Chr5: 8887836-8887956 | Arabidopsis thaliana |
AT5G25520:CDS:4.3 | 60 | Chr5: 8888098-8888157 | Arabidopsis thaliana |
AT5G25520:CDS:1.6 | 2027 | Chr5: 8885550-8887576 | Arabidopsis thaliana |
AT5G25520:CDS:2.5 | 121 | Chr5: 8887836-8887956 | Arabidopsis thaliana |
AT5G25520:CDS:5.1 | 60 | Chr5: 8888531-8888590 | Arabidopsis thaliana |
AT5G25520:CDS:7 | 786 | Chr5: 8888699-8889484 | Arabidopsis thaliana |
AT5G25530:CDS:5 | 439 | Chr5: 8889665-8890103 | Arabidopsis thaliana |
AT5G25530:CDS:5.1 | 439 | Chr5: 8889665-8890103 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G25520:exon:6 | 361 | Chr5: 8888098-8888458 | Arabidopsis thaliana |
AT5G25520:exon:7 | 493 | Chr5: 8888098-8888590 | Arabidopsis thaliana |
AT5G25520:exon:4 | 755 | Chr5: 8887836-8888590 | Arabidopsis thaliana |
AT5G25520:exon:9 | 1236 | Chr5: 8888669-8889904 | Arabidopsis thaliana |
AT5G25520:exon:5 | 207 | Chr5: 8888098-8888304 | Arabidopsis thaliana |
AT5G25520:exon:1 | 158 | Chr5: 8885088-8885245 | Arabidopsis thaliana |
AT5G25520:exon:2 | 2073 | Chr5: 8885504-8887576 | Arabidopsis thaliana |
AT5G25520:exon:3 | 121 | Chr5: 8887836-8887956 | Arabidopsis thaliana |
AT5G25520:exon:8 | 60 | Chr5: 8888531-8888590 | Arabidopsis thaliana |
AT5G25520:exon:10 | 1206 | Chr5: 8888699-8889904 | Arabidopsis thaliana |
AT5G25530:exon:6 | 833 | Chr5: 8889271-8890103 | Arabidopsis thaliana |
AT5G25530:exon:5 | 439 | Chr5: 8889665-8890103 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G25520:five_prime_UTR:1 | 158 | Chr5: 8885088-8885245 | Arabidopsis thaliana |
AT5G25520:five_prime_UTR:2 | 46 | Chr5: 8885504-8885549 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G25530 | locus:2179429 | AT5G25530 | 1858 | Chr5: 8889271-8891128 | A. thaliana | DNAJ heat shock family protein;(source:Araport11) | NULL | DNAJ heat shock family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G25520.7 | 2713 | Chr5: 8885088-8888458 |
AT5G25520.5 | 4051 | Chr5: 8885088-8889904 |
AT5G25520.4 | 4081 | Chr5: 8885088-8889904 |
AT5G25520.3 | 4192 | Chr5: 8885088-8889904 |
AT5G25520.6 | 3648 | Chr5: 8885088-8889904 |
AT5G25520.1 | 3825 | Chr5: 8885088-8889904 |
AT5G25520.2 | 3618 | Chr5: 8885088-8889904 |
AT5G25530.2 | 1588 | Chr5: 8889271-8891128 |
AT5G25530.1 | 1064 | Chr5: 8889665-8890974 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G25520:three_prime_UTR:2 | 301 | Chr5: 8888158-8888458 | Arabidopsis thaliana |
AT5G25520:three_prime_UTR:5 | 1236 | Chr5: 8888669-8889904 | Arabidopsis thaliana |
AT5G25520:three_prime_UTR:3 | 433 | Chr5: 8888158-8888590 | Arabidopsis thaliana |
AT5G25520:three_prime_UTR:1 | 147 | Chr5: 8888158-8888304 | Arabidopsis thaliana |
AT5G25520:three_prime_UTR:4 | 60 | Chr5: 8888531-8888590 | Arabidopsis thaliana |
AT5G25520:three_prime_UTR:6 | 1206 | Chr5: 8888699-8889904 | Arabidopsis thaliana |
AT5G25520:three_prime_UTR:7 | 420 | Chr5: 8889485-8889904 | Arabidopsis thaliana |
AT5G25530:three_prime_UTR:1 | 394 | Chr5: 8889271-8889664 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
translation elongation factor activity | ECO |
biological process | |
DNA-templated transcription | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...