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Gene : SS1 A. thaliana

DB identifier  ? AT5G24300 Secondary Identifier  ? locus:2169749
Name  ? starch synthase 1 Brief Description  Glycogen/starch synthases, ADP-glucose type
TAIR Computational Description  Glycogen/starch synthases, ADP-glucose type;(source:Araport11)
TAIR Curator Summary  SSI is a plastidial enzyme and crucial for the synthesis of normal amylopectin in the leaves of Arabidopsis. The absence of SSI results in a deficiency in the number of shorter glucans which in turn affect the formation and connection of the amylopectin clusters in starch.
TAIR Short Description  Glycogen/starch synthases, ADP-glucose type
TAIR Aliases  ATSS1, SS1

1 Gene Rifs

1 Organism

24 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4640  
Location: Chr5:8266566-8271205

Gene models - SS1 AT5G24300

? Gene models

Transcripts: 2  Exons: 31  Introns: 29 

Overlapping Features

? Genome features that overlap coordinates of this Gene

20 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SSY1_ARATH function Involved in the synthesis of short glycan chains within amylopectin in leaves. Is required to generate chains up to about a degree of polymerization of 10 (DP10).
SSY1_ARATH pathway Glycan biosynthesis; starch biosynthesis.
SSY1_ARATH similarity Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
SSY1_ARATH tissue specificity Expressed in roots, leaves, stems, buds and flowers.

1 Proteins

Function

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets