External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 24, Exons: 13, Five Prime UTRs: 6, mRNAs: 5, Three Prime UTRs: 4, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G24260:CDS:6 | 555 | Chr5: 8234865-8235419 | Arabidopsis thaliana |
AT5G24260:CDS:4 | 1110 | Chr5: 8235527-8236636 | Arabidopsis thaliana |
AT5G24260:CDS:3 | 30 | Chr5: 8236736-8236765 | Arabidopsis thaliana |
AT5G24260:CDS:2 | 198 | Chr5: 8236854-8237051 | Arabidopsis thaliana |
AT5G24260:CDS:1 | 348 | Chr5: 8237463-8237810 | Arabidopsis thaliana |
AT5G24260:CDS:6.1 | 555 | Chr5: 8234865-8235419 | Arabidopsis thaliana |
AT5G24260:CDS:4.1 | 1110 | Chr5: 8235527-8236636 | Arabidopsis thaliana |
AT5G24260:CDS:3.1 | 30 | Chr5: 8236736-8236765 | Arabidopsis thaliana |
AT5G24260:CDS:2.1 | 198 | Chr5: 8236854-8237051 | Arabidopsis thaliana |
AT5G24260:CDS:1.1 | 348 | Chr5: 8237463-8237810 | Arabidopsis thaliana |
AT5G24260:CDS:6.2 | 555 | Chr5: 8234865-8235419 | Arabidopsis thaliana |
AT5G24260:CDS:4.2 | 1110 | Chr5: 8235527-8236636 | Arabidopsis thaliana |
AT5G24260:CDS:3.2 | 30 | Chr5: 8236736-8236765 | Arabidopsis thaliana |
AT5G24260:CDS:2.2 | 198 | Chr5: 8236854-8237051 | Arabidopsis thaliana |
AT5G24260:CDS:1.2 | 348 | Chr5: 8237463-8237810 | Arabidopsis thaliana |
AT5G24260:CDS:6.3 | 555 | Chr5: 8234865-8235419 | Arabidopsis thaliana |
AT5G24260:CDS:4.3 | 1110 | Chr5: 8235527-8236636 | Arabidopsis thaliana |
AT5G24260:CDS:3.3 | 30 | Chr5: 8236736-8236765 | Arabidopsis thaliana |
AT5G24260:CDS:2.3 | 198 | Chr5: 8236854-8237051 | Arabidopsis thaliana |
AT5G24260:CDS:1.3 | 348 | Chr5: 8237463-8237810 | Arabidopsis thaliana |
AT5G24260:CDS:5 | 1188 | Chr5: 8235449-8236636 | Arabidopsis thaliana |
AT5G24260:CDS:3.4 | 30 | Chr5: 8236736-8236765 | Arabidopsis thaliana |
AT5G24260:CDS:2.4 | 198 | Chr5: 8236854-8237051 | Arabidopsis thaliana |
AT5G24260:CDS:1.4 | 348 | Chr5: 8237463-8237810 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G24260:exon:5 | 832 | Chr5: 8237463-8238294 | Arabidopsis thaliana |
AT5G24260:exon:13 | 736 | Chr5: 8234684-8235419 | Arabidopsis thaliana |
AT5G24260:exon:1 | 135 | Chr5: 8238160-8238294 | Arabidopsis thaliana |
AT5G24260:exon:12 | 732 | Chr5: 8234688-8235419 | Arabidopsis thaliana |
AT5G24260:exon:4 | 268 | Chr5: 8237993-8238260 | Arabidopsis thaliana |
AT5G24260:exon:11 | 698 | Chr5: 8234722-8235419 | Arabidopsis thaliana |
AT5G24260:exon:9 | 1110 | Chr5: 8235527-8236636 | Arabidopsis thaliana |
AT5G24260:exon:3 | 121 | Chr5: 8238040-8238160 | Arabidopsis thaliana |
AT5G24260:exon:10 | 1914 | Chr5: 8234723-8236636 | Arabidopsis thaliana |
AT5G24260:exon:8 | 30 | Chr5: 8236736-8236765 | Arabidopsis thaliana |
AT5G24260:exon:7 | 198 | Chr5: 8236854-8237051 | Arabidopsis thaliana |
AT5G24260:exon:6 | 394 | Chr5: 8237463-8237856 | Arabidopsis thaliana |
AT5G24260:exon:2 | 106 | Chr5: 8238160-8238265 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G24260:five_prime_UTR:5 | 484 | Chr5: 8237811-8238294 | Arabidopsis thaliana |
AT5G24260:five_prime_UTR:1 | 135 | Chr5: 8238160-8238294 | Arabidopsis thaliana |
AT5G24260:five_prime_UTR:4 | 268 | Chr5: 8237993-8238260 | Arabidopsis thaliana |
AT5G24260:five_prime_UTR:3 | 121 | Chr5: 8238040-8238160 | Arabidopsis thaliana |
AT5G24260:five_prime_UTR:6 | 46 | Chr5: 8237811-8237856 | Arabidopsis thaliana |
AT5G24260:five_prime_UTR:2 | 106 | Chr5: 8238160-8238265 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G24260.2 | 2906 | Chr5: 8234684-8238294 |
AT5G24260.1 | 2603 | Chr5: 8234684-8238294 |
AT5G24260.3 | 2732 | Chr5: 8234688-8238260 |
AT5G24260.4 | 2551 | Chr5: 8234722-8238160 |
AT5G24260.5 | 2642 | Chr5: 8234723-8238265 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G24260:three_prime_UTR:4 | 181 | Chr5: 8234684-8234864 | Arabidopsis thaliana |
AT5G24260:three_prime_UTR:3 | 177 | Chr5: 8234688-8234864 | Arabidopsis thaliana |
AT5G24260:three_prime_UTR:2 | 143 | Chr5: 8234722-8234864 | Arabidopsis thaliana |
AT5G24260:three_prime_UTR:1 | 726 | Chr5: 8234723-8235448 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE29770 | 383 | Chr5: 8238255-8238637 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE29770:transposon_fragment:1 | 383 | Chr5: 8238255-8238637 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
proteolysis | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...