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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G23908:CDS:1 | 210 | Chr5: 8068071-8068280 | Arabidopsis thaliana |
AT5G23910:CDS:1 | 161 | Chr5: 8068440-8068600 | Arabidopsis thaliana |
AT5G23910:CDS:3 | 166 | Chr5: 8068864-8069029 | Arabidopsis thaliana |
AT5G23910:CDS:4 | 201 | Chr5: 8069124-8069324 | Arabidopsis thaliana |
AT5G23910:CDS:5 | 172 | Chr5: 8069419-8069590 | Arabidopsis thaliana |
AT5G23910:CDS:6 | 203 | Chr5: 8069689-8069891 | Arabidopsis thaliana |
AT5G23910:CDS:7 | 260 | Chr5: 8069980-8070239 | Arabidopsis thaliana |
AT5G23910:CDS:8 | 55 | Chr5: 8070351-8070405 | Arabidopsis thaliana |
AT5G23910:CDS:9 | 33 | Chr5: 8070477-8070509 | Arabidopsis thaliana |
AT5G23910:CDS:10 | 54 | Chr5: 8070604-8070657 | Arabidopsis thaliana |
AT5G23910:CDS:11 | 54 | Chr5: 8070746-8070799 | Arabidopsis thaliana |
AT5G23910:CDS:12 | 45 | Chr5: 8070875-8070919 | Arabidopsis thaliana |
AT5G23910:CDS:13 | 54 | Chr5: 8071035-8071088 | Arabidopsis thaliana |
AT5G23910:CDS:14 | 70 | Chr5: 8071165-8071234 | Arabidopsis thaliana |
AT5G23910:CDS:15 | 69 | Chr5: 8071322-8071390 | Arabidopsis thaliana |
AT5G23910:CDS:16 | 308 | Chr5: 8071477-8071784 | Arabidopsis thaliana |
AT5G23910:CDS:17 | 47 | Chr5: 8071892-8071938 | Arabidopsis thaliana |
AT5G23910:CDS:18 | 22 | Chr5: 8072130-8072151 | Arabidopsis thaliana |
AT5G23910:CDS:19 | 63 | Chr5: 8072249-8072311 | Arabidopsis thaliana |
AT5G23910:CDS:20 | 39 | Chr5: 8072524-8072562 | Arabidopsis thaliana |
AT5G23910:CDS:21 | 42 | Chr5: 8072682-8072723 | Arabidopsis thaliana |
AT5G23910:CDS:2 | 149 | Chr5: 8068452-8068600 | Arabidopsis thaliana |
AT5G23910:CDS:3.1 | 166 | Chr5: 8068864-8069029 | Arabidopsis thaliana |
AT5G23910:CDS:4.1 | 201 | Chr5: 8069124-8069324 | Arabidopsis thaliana |
AT5G23910:CDS:5.1 | 172 | Chr5: 8069419-8069590 | Arabidopsis thaliana |
AT5G23910:CDS:6.1 | 203 | Chr5: 8069689-8069891 | Arabidopsis thaliana |
AT5G23910:CDS:7.1 | 260 | Chr5: 8069980-8070239 | Arabidopsis thaliana |
AT5G23910:CDS:8.1 | 55 | Chr5: 8070351-8070405 | Arabidopsis thaliana |
AT5G23910:CDS:9.1 | 33 | Chr5: 8070477-8070509 | Arabidopsis thaliana |
AT5G23910:CDS:10.1 | 54 | Chr5: 8070604-8070657 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G23908:exon:1 | 210 | Chr5: 8068071-8068280 | Arabidopsis thaliana |
AT5G23910:exon:1 | 380 | Chr5: 8068221-8068600 | Arabidopsis thaliana |
AT5G23910:exon:22 | 372 | Chr5: 8072682-8073053 | Arabidopsis thaliana |
AT5G23910:exon:2 | 149 | Chr5: 8068452-8068600 | Arabidopsis thaliana |
AT5G23910:exon:3 | 166 | Chr5: 8068864-8069029 | Arabidopsis thaliana |
AT5G23910:exon:4 | 201 | Chr5: 8069124-8069324 | Arabidopsis thaliana |
AT5G23910:exon:5 | 172 | Chr5: 8069419-8069590 | Arabidopsis thaliana |
AT5G23910:exon:6 | 203 | Chr5: 8069689-8069891 | Arabidopsis thaliana |
AT5G23910:exon:7 | 260 | Chr5: 8069980-8070239 | Arabidopsis thaliana |
AT5G23910:exon:8 | 55 | Chr5: 8070351-8070405 | Arabidopsis thaliana |
AT5G23910:exon:9 | 33 | Chr5: 8070477-8070509 | Arabidopsis thaliana |
AT5G23910:exon:10 | 54 | Chr5: 8070604-8070657 | Arabidopsis thaliana |
AT5G23910:exon:11 | 54 | Chr5: 8070746-8070799 | Arabidopsis thaliana |
AT5G23910:exon:12 | 45 | Chr5: 8070875-8070919 | Arabidopsis thaliana |
AT5G23910:exon:13 | 54 | Chr5: 8071035-8071088 | Arabidopsis thaliana |
AT5G23910:exon:14 | 70 | Chr5: 8071165-8071234 | Arabidopsis thaliana |
AT5G23910:exon:15 | 69 | Chr5: 8071322-8071390 | Arabidopsis thaliana |
AT5G23910:exon:16 | 308 | Chr5: 8071477-8071784 | Arabidopsis thaliana |
AT5G23910:exon:17 | 47 | Chr5: 8071892-8071938 | Arabidopsis thaliana |
AT5G23910:exon:18 | 22 | Chr5: 8072130-8072151 | Arabidopsis thaliana |
AT5G23910:exon:19 | 63 | Chr5: 8072249-8072311 | Arabidopsis thaliana |
AT5G23910:exon:20 | 39 | Chr5: 8072524-8072562 | Arabidopsis thaliana |
AT5G23910:exon:21 | 310 | Chr5: 8072682-8072991 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G23910:five_prime_UTR:1 | 219 | Chr5: 8068221-8068439 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G23908 | locus:4515103606 | AT5G23908 | 210 | Chr5: 8068071-8068280 | A. thaliana | hypothetical protein;(source:Araport11) | This gene encodes a small protein and has either evidence of transcription or purifying selection. | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G23908.1 | 210 | Chr5: 8068071-8068280 |
AT5G23910.2 | 2667 | Chr5: 8068221-8073053 |
AT5G23910.1 | 2374 | Chr5: 8068452-8072991 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G23910:three_prime_UTR:2 | 330 | Chr5: 8072724-8073053 | Arabidopsis thaliana |
AT5G23910:three_prime_UTR:1 | 268 | Chr5: 8072724-8072991 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A178UBX1_ARATH | similarity | Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. |
KN10C_ARATH | similarity | Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-10 subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
microtubule | ECO |
molecular function | |
ATP binding | ECO |
microtubule binding | ECO |
microtubule motor activity | ECO |
biological process | |
microtubule-based movement | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...