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Gene : AT5G23870 A. thaliana

DB identifier  ? AT5G23870 Secondary Identifier  ? locus:2172833
Brief Description  Pectinacetylesterase family protein
TAIR Computational Description  Pectinacetylesterase family protein;(source:Araport11)
TAIR Curator Summary  Encodes a pectin acetylesterase that removes cell wall acetate associated with pectin formation in Arabidopsis leaves.
TAIR Short Description  Pectinacetylesterase family protein
TAIR Aliases  PAE9

2 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4856  
Location: Chr5:8045540-8050395 reverse strand

Gene models - AT5G23870 AT5G23870

? Gene models

Transcripts: 4  Exons: 52  Introns: 48 

Overlapping Features

? Genome features that overlap coordinates of this Gene

22 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PAE9_ARATH F4KEB8_ARATH PAE9_ARATH-2 function Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties.
PAE9_ARATH F4KEB8_ARATH PAE9_ARATH-2 similarity Belongs to the pectinacetylesterase family.

3 Proteins

Function

Gene Ontology

cellular component
extracellular region  ? ECO  
molecular function
pectin acetylesterase activity  ? ECO  
biological process
cell wall organization  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets