External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G23380:CDS:1 | 81 | Chr5: 7866742-7866822 | Arabidopsis thaliana |
AT5G23380:CDS:2 | 236 | Chr5: 7867866-7868101 | Arabidopsis thaliana |
AT5G23380:CDS:3 | 163 | Chr5: 7868352-7868514 | Arabidopsis thaliana |
AT5G23380:CDS:4 | 86 | Chr5: 7868619-7868704 | Arabidopsis thaliana |
AT5G23380:CDS:6 | 109 | Chr5: 7868952-7869060 | Arabidopsis thaliana |
AT5G23380:CDS:1.1 | 81 | Chr5: 7866742-7866822 | Arabidopsis thaliana |
AT5G23380:CDS:2.1 | 236 | Chr5: 7867866-7868101 | Arabidopsis thaliana |
AT5G23380:CDS:3.1 | 163 | Chr5: 7868352-7868514 | Arabidopsis thaliana |
AT5G23380:CDS:4.1 | 86 | Chr5: 7868619-7868704 | Arabidopsis thaliana |
AT5G23380:CDS:6.1 | 109 | Chr5: 7868952-7869060 | Arabidopsis thaliana |
AT5G23380:CDS:1.2 | 81 | Chr5: 7866742-7866822 | Arabidopsis thaliana |
AT5G23380:CDS:2.2 | 236 | Chr5: 7867866-7868101 | Arabidopsis thaliana |
AT5G23380:CDS:3.2 | 163 | Chr5: 7868352-7868514 | Arabidopsis thaliana |
AT5G23380:CDS:4.2 | 86 | Chr5: 7868619-7868704 | Arabidopsis thaliana |
AT5G23380:CDS:5 | 92 | Chr5: 7868952-7869043 | Arabidopsis thaliana |
AT5G23380:CDS:7 | 248 | Chr5: 7869851-7870098 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G23380:exon:7 | 757 | Chr5: 7868952-7869708 | Arabidopsis thaliana |
AT5G23380:exon:6 | 474 | Chr5: 7868952-7869425 | Arabidopsis thaliana |
AT5G23380:exon:8 | 452 | Chr5: 7869851-7870302 | Arabidopsis thaliana |
AT5G23380:exon:1 | 81 | Chr5: 7866742-7866822 | Arabidopsis thaliana |
AT5G23380:exon:2 | 236 | Chr5: 7867866-7868101 | Arabidopsis thaliana |
AT5G23380:exon:3 | 163 | Chr5: 7868352-7868514 | Arabidopsis thaliana |
AT5G23380:exon:4 | 86 | Chr5: 7868619-7868704 | Arabidopsis thaliana |
AT5G23380:exon:5 | 92 | Chr5: 7868952-7869043 | Arabidopsis thaliana |
AT5G23380:exon:9 | 534 | Chr5: 7869851-7870384 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G23380.2 | 1775 | Chr5: 7866742-7870302 |
AT5G23380.3 | 1492 | Chr5: 7866742-7870302 |
AT5G23380.1 | 1192 | Chr5: 7866742-7870384 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G23380:three_prime_UTR:2 | 648 | Chr5: 7869061-7869708 | Arabidopsis thaliana |
AT5G23380:three_prime_UTR:1 | 365 | Chr5: 7869061-7869425 | Arabidopsis thaliana |
AT5G23380:three_prime_UTR:3 | 452 | Chr5: 7869851-7870302 | Arabidopsis thaliana |
AT5G23380:three_prime_UTR:4 | 286 | Chr5: 7870099-7870384 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE28480 | 97 | Chr5: 7870179-7870275 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE28480:transposon_fragment:1 | 97 | Chr5: 7870179-7870275 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...