External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G20580:CDS:16 | 90 | Chr5: 6958790-6958879 | Arabidopsis thaliana |
AT5G20580:CDS:15 | 63 | Chr5: 6959033-6959095 | Arabidopsis thaliana |
AT5G20580:CDS:14 | 93 | Chr5: 6959280-6959372 | Arabidopsis thaliana |
AT5G20580:CDS:13 | 60 | Chr5: 6959537-6959596 | Arabidopsis thaliana |
AT5G20580:CDS:12 | 60 | Chr5: 6959750-6959809 | Arabidopsis thaliana |
AT5G20580:CDS:11 | 85 | Chr5: 6959991-6960075 | Arabidopsis thaliana |
AT5G20580:CDS:10 | 94 | Chr5: 6960212-6960305 | Arabidopsis thaliana |
AT5G20580:CDS:9 | 56 | Chr5: 6960924-6960979 | Arabidopsis thaliana |
AT5G20580:CDS:8 | 73 | Chr5: 6961406-6961478 | Arabidopsis thaliana |
AT5G20580:CDS:7 | 67 | Chr5: 6961565-6961631 | Arabidopsis thaliana |
AT5G20580:CDS:6 | 50 | Chr5: 6961755-6961804 | Arabidopsis thaliana |
AT5G20580:CDS:4 | 109 | Chr5: 6962001-6962109 | Arabidopsis thaliana |
AT5G20580:CDS:2 | 88 | Chr5: 6962219-6962306 | Arabidopsis thaliana |
AT5G20580:CDS:1 | 59 | Chr5: 6962534-6962592 | Arabidopsis thaliana |
AT5G20580:CDS:16.1 | 90 | Chr5: 6958790-6958879 | Arabidopsis thaliana |
AT5G20580:CDS:15.1 | 63 | Chr5: 6959033-6959095 | Arabidopsis thaliana |
AT5G20580:CDS:14.1 | 93 | Chr5: 6959280-6959372 | Arabidopsis thaliana |
AT5G20580:CDS:13.1 | 60 | Chr5: 6959537-6959596 | Arabidopsis thaliana |
AT5G20580:CDS:12.1 | 60 | Chr5: 6959750-6959809 | Arabidopsis thaliana |
AT5G20580:CDS:11.1 | 85 | Chr5: 6959991-6960075 | Arabidopsis thaliana |
AT5G20580:CDS:10.1 | 94 | Chr5: 6960212-6960305 | Arabidopsis thaliana |
AT5G20580:CDS:9.1 | 56 | Chr5: 6960924-6960979 | Arabidopsis thaliana |
AT5G20580:CDS:8.1 | 73 | Chr5: 6961406-6961478 | Arabidopsis thaliana |
AT5G20580:CDS:7.1 | 67 | Chr5: 6961565-6961631 | Arabidopsis thaliana |
AT5G20580:CDS:6.1 | 50 | Chr5: 6961755-6961804 | Arabidopsis thaliana |
AT5G20580:CDS:5 | 105 | Chr5: 6962001-6962105 | Arabidopsis thaliana |
AT5G20580:CDS:3 | 92 | Chr5: 6962215-6962306 | Arabidopsis thaliana |
AT5G20580:CDS:1.1 | 59 | Chr5: 6962534-6962592 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G20580:exon:18 | 283 | Chr5: 6958597-6958879 | Arabidopsis thaliana |
AT5G20580:exon:5 | 109 | Chr5: 6962001-6962109 | Arabidopsis thaliana |
AT5G20580:exon:3 | 88 | Chr5: 6962219-6962306 | Arabidopsis thaliana |
AT5G20580:exon:1 | 383 | Chr5: 6962534-6962916 | Arabidopsis thaliana |
AT5G20580:exon:17 | 252 | Chr5: 6958628-6958879 | Arabidopsis thaliana |
AT5G20580:exon:16 | 63 | Chr5: 6959033-6959095 | Arabidopsis thaliana |
AT5G20580:exon:15 | 93 | Chr5: 6959280-6959372 | Arabidopsis thaliana |
AT5G20580:exon:14 | 60 | Chr5: 6959537-6959596 | Arabidopsis thaliana |
AT5G20580:exon:13 | 60 | Chr5: 6959750-6959809 | Arabidopsis thaliana |
AT5G20580:exon:12 | 85 | Chr5: 6959991-6960075 | Arabidopsis thaliana |
AT5G20580:exon:11 | 94 | Chr5: 6960212-6960305 | Arabidopsis thaliana |
AT5G20580:exon:10 | 56 | Chr5: 6960924-6960979 | Arabidopsis thaliana |
AT5G20580:exon:9 | 73 | Chr5: 6961406-6961478 | Arabidopsis thaliana |
AT5G20580:exon:8 | 67 | Chr5: 6961565-6961631 | Arabidopsis thaliana |
AT5G20580:exon:7 | 50 | Chr5: 6961755-6961804 | Arabidopsis thaliana |
AT5G20580:exon:6 | 105 | Chr5: 6962001-6962105 | Arabidopsis thaliana |
AT5G20580:exon:4 | 92 | Chr5: 6962215-6962306 | Arabidopsis thaliana |
AT5G20580:exon:2 | 271 | Chr5: 6962534-6962804 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G20580:five_prime_UTR:1 | 324 | Chr5: 6962593-6962916 | Arabidopsis thaliana |
AT5G20580:five_prime_UTR:2 | 212 | Chr5: 6962593-6962804 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G20580.2 | 1564 | Chr5: 6958597-6962916 |
AT5G20580.1 | 1421 | Chr5: 6958628-6962804 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G20580:three_prime_UTR:2 | 193 | Chr5: 6958597-6958789 | Arabidopsis thaliana |
AT5G20580:three_prime_UTR:1 | 162 | Chr5: 6958628-6958789 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...