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Gene : AT5G20170 A. thaliana

DB identifier  ? AT5G20170 Secondary Identifier  ? locus:2149294
Brief Description  RNA polymerase II transcription mediator
TAIR Computational Description  RNA polymerase II transcription mediator;(source:Araport11)
TAIR Curator Summary  Encodes a subunit of the Mediator complex that physically interacts with DNA repair proteins is an important regulator of the DNA damage response after UV-B irradiation.
TAIR Short Description  RNA polymerase II transcription mediators
TAIR Aliases  MED17

1 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3545  
Location: Chr5:6807375-6810919 reverse strand

Gene models - AT5G20170 AT5G20170

? Gene models

Transcripts: 1  Exons: 8  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
MED17_ARATH function Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
MED17_ARATH similarity Belongs to the Mediator complex subunit 17 family.

1 Proteins

Function

Gene Ontology

cellular component
mediator complex  ? ECO  
core mediator complex  ? ECO  
molecular function
transcription coregulator activity  ? ECO  
biological process
miRNA processing  ? ECO  
regulation of transcription by RNA polymerase II  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets