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Gene : AT5G20160 A. thaliana

DB identifier  ? AT5G20160 Secondary Identifier  ? locus:2149269
Brief Description  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
TAIR Computational Description  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

0 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1533  
Location: Chr5:6803694-6805226 reverse strand

Gene models - AT5G20160 AT5G20160

? Gene models

Transcripts: 3  Exons: 11  Introns: 8 

Overlapping Features Displayer

13 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
F4K456_ARATH Q94AF6_ARATH F4K455_ARATH function Common component of the spliceosome and rRNA processing machinery.
F4K456_ARATH function Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs.
F4K456_ARATH Q94AF6_ARATH F4K455_ARATH similarity Belongs to the eukaryotic ribosomal protein eL8 family.

3 Proteins

Function

Gene Ontology

cellular component
ribosome  ? ECO  
nucleolus  ? ECO  
ribonucleoprotein complex  ? ECO  
membrane  ? ECO  
plastid  ? ECO  
molecular function
RNA binding  ? ECO  
biological process
mRNA splicing, via spliceosome  ? ECO  
ribosome biogenesis  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets