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Gene : NUDX19 A. thaliana

DB identifier  ? AT5G20070 Secondary Identifier  ? locus:2147665
Name  ? nudix hydrolase homolog 19 Brief Description  nudix hydrolase homolog 19
TAIR Computational Description  nudix hydrolase homolog 19;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  nudix hydrolase homolog 19
TAIR Aliases  ATNUDT19, ATNUDX19, NUDX19

2 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2661  
Location: Chr5:6779841-6782501

Gene models - NUDX19 AT5G20070

? Gene models

Transcripts: 1  Exons: 6  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
NUD19_ARATH function mRNA decapping enzyme that specifically removes the nicotinamide adenine dinucleotide (NAD) cap from a subset of mRNAs by hydrolyzing the diphosphate linkage to produce nicotinamide mononucleotide (NMN) and 5' monophosphate mRNA. The NAD-cap is present at the 5'-end of some RNAs; in contrast to the canonical N7 methylguanosine (m7G) cap, the NAD cap promotes mRNA decay (By similarity). Mediates the hydrolysis of some nucleoside diphosphate derivatives. Has a high affinity for NADPH compared with that for NADH (PubMed:18815383).
NUD19_ARATH similarity Belongs to the Nudix hydrolase family. NudC subfamily.
NUD19_ARATH tissue specificity Expressed in roots, leaves, stems and inflorescences.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast  ? ECO  
molecular function
NAD+ diphosphatase activity  ? ECO  
metal ion binding  ? ECO  
NADH pyrophosphatase activity  ? ECO  
RNA NAD-cap (NMN-forming) hydrolase activity  ? ECO  
biological process
NADP catabolic process  ? ECO  
NADH metabolic process  ? ECO  
NAD catabolic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets