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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G19950:CDS:7 | 150 | Chr5: 6741163-6741312 | Arabidopsis thaliana |
AT5G19950:CDS:5 | 293 | Chr5: 6741486-6741778 | Arabidopsis thaliana |
AT5G19950:CDS:4 | 219 | Chr5: 6741954-6742172 | Arabidopsis thaliana |
AT5G19950:CDS:3 | 214 | Chr5: 6742670-6742883 | Arabidopsis thaliana |
AT5G19950:CDS:2 | 168 | Chr5: 6743085-6743252 | Arabidopsis thaliana |
AT5G19950:CDS:1 | 282 | Chr5: 6743421-6743702 | Arabidopsis thaliana |
AT5G19950:CDS:6 | 156 | Chr5: 6741163-6741318 | Arabidopsis thaliana |
AT5G19950:CDS:5.1 | 293 | Chr5: 6741486-6741778 | Arabidopsis thaliana |
AT5G19950:CDS:4.1 | 219 | Chr5: 6741954-6742172 | Arabidopsis thaliana |
AT5G19950:CDS:3.1 | 214 | Chr5: 6742670-6742883 | Arabidopsis thaliana |
AT5G19950:CDS:2.1 | 168 | Chr5: 6743085-6743252 | Arabidopsis thaliana |
AT5G19950:CDS:1.1 | 282 | Chr5: 6743421-6743702 | Arabidopsis thaliana |
AT5G19950:CDS:6.1 | 156 | Chr5: 6741163-6741318 | Arabidopsis thaliana |
AT5G19950:CDS:5.2 | 293 | Chr5: 6741486-6741778 | Arabidopsis thaliana |
AT5G19950:CDS:4.2 | 219 | Chr5: 6741954-6742172 | Arabidopsis thaliana |
AT5G19950:CDS:3.2 | 214 | Chr5: 6742670-6742883 | Arabidopsis thaliana |
AT5G19950:CDS:2.2 | 168 | Chr5: 6743085-6743252 | Arabidopsis thaliana |
AT5G19950:CDS:1.2 | 282 | Chr5: 6743421-6743702 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G19940:exon:6 | 250 | Chr5: 6740708-6740957 | Arabidopsis thaliana |
AT5G19940:exon:5 | 487 | Chr5: 6740471-6740957 | Arabidopsis thaliana |
AT5G19950:exon:9 | 536 | Chr5: 6740777-6741312 | Arabidopsis thaliana |
AT5G19950:exon:8 | 542 | Chr5: 6740777-6741318 | Arabidopsis thaliana |
AT5G19950:exon:2 | 353 | Chr5: 6743421-6743773 | Arabidopsis thaliana |
AT5G19950:exon:10 | 240 | Chr5: 6740777-6741016 | Arabidopsis thaliana |
AT5G19950:exon:7 | 183 | Chr5: 6741136-6741318 | Arabidopsis thaliana |
AT5G19950:exon:6 | 293 | Chr5: 6741486-6741778 | Arabidopsis thaliana |
AT5G19950:exon:5 | 219 | Chr5: 6741954-6742172 | Arabidopsis thaliana |
AT5G19950:exon:4 | 214 | Chr5: 6742670-6742883 | Arabidopsis thaliana |
AT5G19950:exon:3 | 168 | Chr5: 6743085-6743252 | Arabidopsis thaliana |
AT5G19950:exon:1 | 430 | Chr5: 6743421-6743850 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G19950:five_prime_UTR:2 | 71 | Chr5: 6743703-6743773 | Arabidopsis thaliana |
AT5G19950:five_prime_UTR:1 | 148 | Chr5: 6743703-6743850 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G19940 | locus:2147720 | AT5G19940 | 1334 | Chr5: 6739624-6740957 | A. thaliana | Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) | Putative fibrillin; enables plants to cope with moderate light stress and affects cadmium tolerance. | Plastid-lipid associated protein PAP / fibrillin family protein | FBN6, PAP8 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G19940.2 | 987 | Chr5: 6739624-6740957 |
AT5G19940.1 | 1085 | Chr5: 6739624-6740957 |
AT5G19950.3 | 1783 | Chr5: 6740777-6743773 |
AT5G19950.1 | 1789 | Chr5: 6740777-6743773 |
AT5G19950.2 | 1747 | Chr5: 6740777-6743850 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G19940:three_prime_UTR:2 | 210 | Chr5: 6740748-6740957 | Arabidopsis thaliana |
AT5G19940:three_prime_UTR:1 | 296 | Chr5: 6740662-6740957 | Arabidopsis thaliana |
AT5G19950:three_prime_UTR:2 | 386 | Chr5: 6740777-6741162 | Arabidopsis thaliana |
AT5G19950:three_prime_UTR:3 | 240 | Chr5: 6740777-6741016 | Arabidopsis thaliana |
AT5G19950:three_prime_UTR:1 | 27 | Chr5: 6741136-6741162 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...