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Gene : NCBP A. thaliana

DB identifier  ? AT5G18110 Secondary Identifier  ? locus:2172339
Name  ? novel cap-binding protein Brief Description  Putative cap-binding protein
TAIR Computational Description  Putative cap-binding protein;(source:Araport11)
TAIR Curator Summary  Involved in resistance to Plutella xylostella through the accumulation of the homoterpene DMNT.
TAIR Short Description  novel cap-binding protein
TAIR Aliases  NCBP, RPX1

0 Gene Rifs

1 Organism

14 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1938  
Location: Chr5:5988744-5990681 reverse strand

Gene models - NCBP AT5G18110

? Gene models

Transcripts: 1  Exons: 6  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
IF4E5_ARATH function Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures.
IF4E5_ARATH similarity Belongs to the eukaryotic initiation factor 4E family.

1 Proteins

Function

Gene Ontology

cellular component
cytoplasm  ? ECO  
molecular function
translation initiation factor activity  ? ECO  
RNA binding  ? ECO  
biological process
response to virus  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets