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Gene : CSA1 A. thaliana

DB identifier  ? AT5G17880 Secondary Identifier  ? locus:2170333
Name  ? constitutive shade-avoidance1 Brief Description  disease resistance protein (TIR-NBS-LRR class)
TAIR Computational Description  disease resistance protein (TIR-NBS-LRR class);(source:Araport11)
TAIR Curator Summary  Encodes a TIR-NBS-LRR protein CSA1 that functions in photomorphogenic development. csa1 mutants display a constitutive shade-avoidance (CSA) phenotype (long stem) under high red:far-red rations (i.e. in the absence of a shade signal). csa1 mutation can be complemented by RPS4, a TIR-NBS-LRR protein that confers resistance against bacterium Pseudomonas syringae.
TAIR Short Description  disease resistance protein (TIR-NBS-LRR class)
TAIR Aliases  CSA1

3 Gene Rifs

1 Organism

10 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4484  
Location: Chr5:5908834-5913317 reverse strand

Gene models - CSA1 AT5G17880

? Gene models

Transcripts: 2  Exons: 11  Introns: 9 

Overlapping Features

? Genome features that overlap coordinates of this Gene

10 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CSA1_ARATH function TIR-NB-LRR receptor-like protein that functions in photomorphogenic development. May function downstream of phytochrome B (phyB) signaling.

2 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
ATP binding  ? ECO  
NAD+ nucleotidase, cyclic ADP-ribose generating  ? ECO  
ADP binding  ? ECO  
NAD+ nucleosidase activity  ? ECO  
biological process
response to red light  ? ECO  
defense response to bacterium  ? ECO  
response to light stimulus  ? ECO  
signal transduction  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets