External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G17460:CDS:4 | 705 | Chr5: 5757582-5758286 | Arabidopsis thaliana |
AT5G17460:CDS:3 | 803 | Chr5: 5757582-5758384 | Arabidopsis thaliana |
AT5G17460:CDS:2 | 80 | Chr5: 5758654-5758733 | Arabidopsis thaliana |
AT5G17460:CDS:1 | 47 | Chr5: 5758821-5758867 | Arabidopsis thaliana |
AT5G17460:CDS:3.1 | 803 | Chr5: 5757582-5758384 | Arabidopsis thaliana |
AT5G17460:CDS:2.1 | 80 | Chr5: 5758654-5758733 | Arabidopsis thaliana |
AT5G17460:CDS:1.1 | 47 | Chr5: 5758821-5758867 | Arabidopsis thaliana |
AT5G17460:CDS:3.2 | 803 | Chr5: 5757582-5758384 | Arabidopsis thaliana |
AT5G17460:CDS:2.2 | 80 | Chr5: 5758654-5758733 | Arabidopsis thaliana |
AT5G17460:CDS:1.2 | 47 | Chr5: 5758821-5758867 | Arabidopsis thaliana |
AT5G17460:CDS:3.3 | 803 | Chr5: 5757582-5758384 | Arabidopsis thaliana |
AT5G17460:CDS:2.3 | 80 | Chr5: 5758654-5758733 | Arabidopsis thaliana |
AT5G17460:CDS:1.3 | 47 | Chr5: 5758821-5758867 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G17460:exon:4 | 1164 | Chr5: 5758654-5759817 | Arabidopsis thaliana |
AT5G17460:exon:9 | 392 | Chr5: 5757073-5757464 | Arabidopsis thaliana |
AT5G17460:exon:10 | 378 | Chr5: 5757073-5757450 | Arabidopsis thaliana |
AT5G17460:exon:2 | 997 | Chr5: 5758821-5759817 | Arabidopsis thaliana |
AT5G17460:exon:7 | 365 | Chr5: 5757100-5757464 | Arabidopsis thaliana |
AT5G17460:exon:8 | 351 | Chr5: 5757100-5757450 | Arabidopsis thaliana |
AT5G17460:exon:6 | 843 | Chr5: 5757542-5758384 | Arabidopsis thaliana |
AT5G17460:exon:5 | 80 | Chr5: 5758654-5758733 | Arabidopsis thaliana |
AT5G17460:exon:3 | 81 | Chr5: 5758821-5758901 | Arabidopsis thaliana |
AT5G17460:exon:1 | 22 | Chr5: 5759428-5759449 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G17460:five_prime_UTR:5 | 98 | Chr5: 5758287-5758384 | Arabidopsis thaliana |
AT5G17460:five_prime_UTR:4 | 1164 | Chr5: 5758654-5759817 | Arabidopsis thaliana |
AT5G17460:five_prime_UTR:2 | 950 | Chr5: 5758868-5759817 | Arabidopsis thaliana |
AT5G17460:five_prime_UTR:3 | 34 | Chr5: 5758868-5758901 | Arabidopsis thaliana |
AT5G17460:five_prime_UTR:1 | 22 | Chr5: 5759428-5759449 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G17460.3 | 2385 | Chr5: 5757073-5759817 |
AT5G17460.2 | 2312 | Chr5: 5757073-5759817 |
AT5G17460.1 | 2298 | Chr5: 5757073-5759817 |
AT5G17460.4 | 1391 | Chr5: 5757100-5759449 |
AT5G17460.5 | 1377 | Chr5: 5757100-5759449 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G17460:three_prime_UTR:4 | 392 | Chr5: 5757073-5757464 | Arabidopsis thaliana |
AT5G17460:three_prime_UTR:5 | 378 | Chr5: 5757073-5757450 | Arabidopsis thaliana |
AT5G17460:three_prime_UTR:2 | 365 | Chr5: 5757100-5757464 | Arabidopsis thaliana |
AT5G17460:three_prime_UTR:3 | 351 | Chr5: 5757100-5757450 | Arabidopsis thaliana |
AT5G17460:three_prime_UTR:1 | 40 | Chr5: 5757542-5757581 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...