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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G17270:CDS:4 | 170 | Chr5: 5681235-5681404 | Arabidopsis thaliana |
AT5G17270:CDS:5 | 82 | Chr5: 5681666-5681747 | Arabidopsis thaliana |
AT5G17270:CDS:6 | 262 | Chr5: 5681823-5682084 | Arabidopsis thaliana |
AT5G17270:CDS:7 | 59 | Chr5: 5682389-5682447 | Arabidopsis thaliana |
AT5G17270:CDS:8 | 90 | Chr5: 5682592-5682681 | Arabidopsis thaliana |
AT5G17270:CDS:9 | 92 | Chr5: 5682817-5682908 | Arabidopsis thaliana |
AT5G17270:CDS:10 | 99 | Chr5: 5683009-5683107 | Arabidopsis thaliana |
AT5G17270:CDS:11 | 78 | Chr5: 5683227-5683304 | Arabidopsis thaliana |
AT5G17270:CDS:12 | 85 | Chr5: 5683517-5683601 | Arabidopsis thaliana |
AT5G17270:CDS:13 | 59 | Chr5: 5683680-5683738 | Arabidopsis thaliana |
AT5G17270:CDS:14 | 70 | Chr5: 5683854-5683923 | Arabidopsis thaliana |
AT5G17270:CDS:15 | 92 | Chr5: 5684060-5684151 | Arabidopsis thaliana |
AT5G17270:CDS:16 | 63 | Chr5: 5684320-5684382 | Arabidopsis thaliana |
AT5G17270:CDS:17 | 67 | Chr5: 5684461-5684527 | Arabidopsis thaliana |
AT5G17270:CDS:18 | 234 | Chr5: 5684668-5684901 | Arabidopsis thaliana |
AT5G17270:CDS:19 | 117 | Chr5: 5685037-5685153 | Arabidopsis thaliana |
AT5G17270:CDS:20 | 153 | Chr5: 5685237-5685389 | Arabidopsis thaliana |
AT5G17270:CDS:21 | 114 | Chr5: 5685484-5685597 | Arabidopsis thaliana |
AT5G17270:CDS:1 | 413 | Chr5: 5679995-5680407 | Arabidopsis thaliana |
AT5G17270:CDS:2 | 139 | Chr5: 5680523-5680661 | Arabidopsis thaliana |
AT5G17270:CDS:3 | 332 | Chr5: 5681073-5681404 | Arabidopsis thaliana |
AT5G17270:CDS:5.1 | 82 | Chr5: 5681666-5681747 | Arabidopsis thaliana |
AT5G17270:CDS:6.1 | 262 | Chr5: 5681823-5682084 | Arabidopsis thaliana |
AT5G17270:CDS:7.1 | 59 | Chr5: 5682389-5682447 | Arabidopsis thaliana |
AT5G17270:CDS:8.1 | 90 | Chr5: 5682592-5682681 | Arabidopsis thaliana |
AT5G17270:CDS:9.1 | 92 | Chr5: 5682817-5682908 | Arabidopsis thaliana |
AT5G17270:CDS:10.1 | 99 | Chr5: 5683009-5683107 | Arabidopsis thaliana |
AT5G17270:CDS:11.1 | 78 | Chr5: 5683227-5683304 | Arabidopsis thaliana |
AT5G17270:CDS:12.1 | 85 | Chr5: 5683517-5683601 | Arabidopsis thaliana |
AT5G17270:CDS:13.1 | 59 | Chr5: 5683680-5683738 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G17270:exon:3 | 882 | Chr5: 5680523-5681404 | Arabidopsis thaliana |
AT5G17270:exon:1 | 486 | Chr5: 5679922-5680407 | Arabidopsis thaliana |
AT5G17270:exon:2 | 139 | Chr5: 5680523-5680661 | Arabidopsis thaliana |
AT5G17270:exon:4 | 332 | Chr5: 5681073-5681404 | Arabidopsis thaliana |
AT5G17270:exon:5 | 82 | Chr5: 5681666-5681747 | Arabidopsis thaliana |
AT5G17270:exon:6 | 262 | Chr5: 5681823-5682084 | Arabidopsis thaliana |
AT5G17270:exon:7 | 59 | Chr5: 5682389-5682447 | Arabidopsis thaliana |
AT5G17270:exon:8 | 90 | Chr5: 5682592-5682681 | Arabidopsis thaliana |
AT5G17270:exon:9 | 92 | Chr5: 5682817-5682908 | Arabidopsis thaliana |
AT5G17270:exon:10 | 99 | Chr5: 5683009-5683107 | Arabidopsis thaliana |
AT5G17270:exon:11 | 78 | Chr5: 5683227-5683304 | Arabidopsis thaliana |
AT5G17270:exon:12 | 85 | Chr5: 5683517-5683601 | Arabidopsis thaliana |
AT5G17270:exon:13 | 59 | Chr5: 5683680-5683738 | Arabidopsis thaliana |
AT5G17270:exon:14 | 70 | Chr5: 5683854-5683923 | Arabidopsis thaliana |
AT5G17270:exon:15 | 92 | Chr5: 5684060-5684151 | Arabidopsis thaliana |
AT5G17270:exon:16 | 63 | Chr5: 5684320-5684382 | Arabidopsis thaliana |
AT5G17270:exon:17 | 67 | Chr5: 5684461-5684527 | Arabidopsis thaliana |
AT5G17270:exon:18 | 234 | Chr5: 5684668-5684901 | Arabidopsis thaliana |
AT5G17270:exon:19 | 117 | Chr5: 5685037-5685153 | Arabidopsis thaliana |
AT5G17270:exon:20 | 153 | Chr5: 5685237-5685389 | Arabidopsis thaliana |
AT5G17270:exon:21 | 311 | Chr5: 5685484-5685794 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G17270:five_prime_UTR:2 | 486 | Chr5: 5679922-5680407 | Arabidopsis thaliana |
AT5G17270:five_prime_UTR:3 | 712 | Chr5: 5680523-5681234 | Arabidopsis thaliana |
AT5G17270:five_prime_UTR:1 | 73 | Chr5: 5679922-5679994 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G17270.2 | 3381 | Chr5: 5679922-5685794 |
AT5G17270.1 | 2970 | Chr5: 5679922-5685794 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G17270:three_prime_UTR:1 | 197 | Chr5: 5685598-5685794 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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